RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, human

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD4-205	ENST00000467574	PPEF1	O14829	653 aa	Predicted RBP	32.99	■■■□□ 2.87
PDCD4-205	ENST00000467574	HSP90B1	P14625	803 aa	Known RBP	32.99	■■■□□ 2.87
PDCD4-205	ENST00000467574	SLC4A10	Q6U841	1118 aa		32.99	■■■□□ 2.87
PDCD4-205	ENST00000467574	GRAP	Q13588	217 aa		32.98	■■■□□ 2.87
PDCD4-205	ENST00000467574	DDX46	Q7L014	1031 aa	Known RBP	32.98	■■■□□ 2.87
PDCD4-205	ENST00000467574	GRAPL	Q8TC17	118 aa	Predicted RBP	32.98	■■■□□ 2.87
PDCD4-205	ENST00000467574	ALDH1L1	O75891	902 aa		32.97	■■■□□ 2.87
PDCD4-205	ENST00000467574	C9orf131	Q5VYM1	1079 aa		32.97	■■■□□ 2.87
PDCD4-205	ENST00000467574	CTSW	P56202	376 aa		32.96	■■■□□ 2.87
PDCD4-205	ENST00000467574	PLA2G12B	Q9BX93	195 aa		32.96	■■■□□ 2.87
PDCD4-205	ENST00000467574	SRCIN1	Q9C0H9	1055 aa		32.96	■■■□□ 2.87
PDCD4-205	ENST00000467574	NOB1	Q9ULX3	412 aa	Known RBP	32.96	■■■□□ 2.87
PDCD4-205	ENST00000467574	TAOK3	Q9H2K8	898 aa		32.95	■■■□□ 2.87
PDCD4-205	ENST00000467574	SPEF2	Q9C093	1822 aa		32.95	■■■□□ 2.86
PDCD4-205	ENST00000467574	LMNB1	P20700	586 aa		32.94	■■■□□ 2.86
PDCD4-205	ENST00000467574	CELF1	Q92879	486 aa	Known RBP	32.94	■■■□□ 2.86
PDCD4-205	ENST00000467574	ATP6V0A2	Q9Y487	856 aa		32.94	■■■□□ 2.86
PDCD4-205	ENST00000467574	KIF16B	Q96L93	1317 aa		32.94	■■■□□ 2.86
PDCD4-205	ENST00000467574	GRM8	O00222	908 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	BBOX1	O75936	387 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	CCDC152	Q4G0S7	254 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	CC2D2B	Q6DHV5	1058 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	RNF181	Q9P0P0	153 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	LTBP1	Q14766	1721 aa		32.93	■■■□□ 2.86
PDCD4-205	ENST00000467574	BCAR3	O75815	825 aa		32.92	■■■□□ 2.86
PDCD4-205	ENST00000467574	RTKN2	Q8IZC4	609 aa		32.92	■■■□□ 2.86
PDCD4-205	ENST00000467574	TTLL11	Q8NHH1	800 aa		32.92	■■■□□ 2.86
PDCD4-205	ENST00000467574	SEC31B	Q9NQW1	1179 aa		32.92	■■■□□ 2.86
PDCD4-205	ENST00000467574	RTL9	Q8NET4	1388 aa		32.92	■■■□□ 2.86
PDCD4-205	ENST00000467574	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.91	■■■□□ 2.86
PDCD4-205	ENST00000467574	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.91	■■■□□ 2.86
PDCD4-205	ENST00000467574	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.9	■■■□□ 2.86
PDCD4-205	ENST00000467574	DUOX1	Q9NRD9	1551 aa		32.9	■■■□□ 2.86
PDCD4-205	ENST00000467574	UTY	O14607	1347 aa		32.89	■■■□□ 2.86
PDCD4-205	ENST00000467574	SP8	Q8IXZ3	490 aa		32.88	■■■□□ 2.85
PDCD4-205	ENST00000467574	ARHGAP45	Q92619	1136 aa		32.88	■■■□□ 2.85
PDCD4-205	ENST00000467574	PSMD1	Q99460	953 aa		32.88	■■■□□ 2.85
PDCD4-205	ENST00000467574	API5	Q9BZZ5	524 aa	Known RBP	32.88	■■■□□ 2.85
PDCD4-205	ENST00000467574	GREM2	Q9H772	168 aa		32.88	■■■□□ 2.85
PDCD4-205	ENST00000467574	TMC4	Q7Z404	712 aa		32.87	■■■□□ 2.85
PDCD4-205	ENST00000467574	CSF1R	P07333	972 aa		32.86	■■■□□ 2.85
PDCD4-205	ENST00000467574	FOXO4	P98177	505 aa		32.86	■■■□□ 2.85
PDCD4-205	ENST00000467574	GRIPAP1	Q4V328	841 aa		32.86	■■■□□ 2.85
PDCD4-205	ENST00000467574	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.86	■■■□□ 2.85
PDCD4-205	ENST00000467574	COL4A5	P29400	1685 aa		32.85	■■■□□ 2.85
PDCD4-205	ENST00000467574	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.85	■■■□□ 2.85
PDCD4-205	ENST00000467574	RPS8	P62241	208 aa	Known RBP	32.85	■■■□□ 2.85
PDCD4-205	ENST00000467574	EPHA10	Q5JZY3	1008 aa		32.85	■■■□□ 2.85
PDCD4-205	ENST00000467574	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.85	■■■□□ 2.85
PDCD4-205	ENST00000467574	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.84	■■■□□ 2.85
PDCD4-205	ENST00000467574	FAM161A	Q3B820	660 aa		32.83	■■■□□ 2.85
PDCD4-205	ENST00000467574	KAZALD1	Q96I82	304 aa		32.83	■■■□□ 2.85
PDCD4-205	ENST00000467574	TRIM27	P14373	513 aa		32.82	■■■□□ 2.84
PDCD4-205	ENST00000467574	SUCLG2	Q96I99	432 aa		32.82	■■■□□ 2.84
PDCD4-205	ENST00000467574	USP44	Q9H0E7	712 aa		32.82	■■■□□ 2.84
PDCD4-205	ENST00000467574	TNN	Q9UQP3	1299 aa		32.82	■■■□□ 2.84
PDCD4-205	ENST00000467574	CCT4	P50991	539 aa	Known RBP	32.81	■■■□□ 2.84
PDCD4-205	ENST00000467574	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.81	■■■□□ 2.84
PDCD4-205	ENST00000467574	ATF7IP	Q6VMQ6	1270 aa		32.8	■■■□□ 2.84
PDCD4-205	ENST00000467574		A0A1B0GUL6	1792 aa		32.8	■■■□□ 2.84
PDCD4-205	ENST00000467574	IARS	P41252	1262 aa	Known RBP	32.79	■■■□□ 2.84
PDCD4-205	ENST00000467574	FRAT1	Q92837	279 aa	Predicted RBP	32.79	■■■□□ 2.84
PDCD4-205	ENST00000467574	CDC5L	Q99459	802 aa	Known RBP	32.79	■■■□□ 2.84
PDCD4-205	ENST00000467574	IPO8	O15397	1037 aa	Known RBP	32.78	■■■□□ 2.84
PDCD4-205	ENST00000467574	ITGA6	P23229	1130 aa		32.78	■■■□□ 2.84
PDCD4-205	ENST00000467574	ANKRD18A	Q8IVF6	992 aa		32.78	■■■□□ 2.84
PDCD4-205	ENST00000467574	TMX4	Q9H1E5	349 aa	Predicted RBP	32.78	■■■□□ 2.84
PDCD4-205	ENST00000467574	DPP8	Q6V1X1	898 aa	Predicted RBP	32.77	■■■□□ 2.84
PDCD4-205	ENST00000467574	MPND	Q8N594	471 aa		32.77	■■■□□ 2.84
PDCD4-205	ENST00000467574	INTS3	Q68E01	1043 aa	Known RBP	32.76	■■■□□ 2.83
PDCD4-205	ENST00000467574	LMBR1L	Q6UX01	489 aa		32.76	■■■□□ 2.83
PDCD4-205	ENST00000467574	GPSM2	P81274	684 aa		32.75	■■■□□ 2.83
PDCD4-205	ENST00000467574	ZKSCAN2	Q63HK3	967 aa		32.74	■■■□□ 2.83
PDCD4-205	ENST00000467574	ZNF526	Q8TF50	670 aa	Predicted RBP	32.74	■■■□□ 2.83
PDCD4-205	ENST00000467574	RABL6	Q3YEC7	729 aa	Predicted RBP	32.73	■■■□□ 2.83
PDCD4-205	ENST00000467574	ANKRD44	Q8N8A2	993 aa		32.73	■■■□□ 2.83
PDCD4-205	ENST00000467574	BICC1	Q9H694	974 aa	Known RBP	32.73	■■■□□ 2.83
PDCD4-205	ENST00000467574	BSDC1	Q9NW68	430 aa	Predicted RBP	32.73	■■■□□ 2.83
PDCD4-205	ENST00000467574	PODXL2	Q9NZ53	605 aa		32.72	■■■□□ 2.83
PDCD4-205	ENST00000467574	SUPT20H	Q8NEM7	779 aa		32.71	■■■□□ 2.83
PDCD4-205	ENST00000467574	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.71	■■■□□ 2.83
PDCD4-205	ENST00000467574	ANKRD18B	A2A2Z9	1011 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	AOC3	Q16853	763 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	CLUAP1	Q96AJ1	413 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	POLL	Q9UGP5	575 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	CHMP3	Q9Y3E7	222 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	WDR90	Q96KV7	1748 aa		32.7	■■■□□ 2.83
PDCD4-205	ENST00000467574	IFIT5	Q13325	482 aa	Known RBP	32.69	■■■□□ 2.82
PDCD4-205	ENST00000467574	YTHDC1	Q96MU7	727 aa	Known RBP	32.69	■■■□□ 2.82
PDCD4-205	ENST00000467574	MEIS3	Q99687	375 aa		32.69	■■■□□ 2.82
PDCD4-205	ENST00000467574	VPS33B	Q9H267	617 aa		32.69	■■■□□ 2.82
PDCD4-205	ENST00000467574	GLTPD2	A6NH11	291 aa		32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	PPIP5K2	O43314	1243 aa		32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	IGHMBP2	P38935	993 aa	Known RBP	32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	KIAA2012	Q0VF49	1180 aa		32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	LARGE2	Q8N3Y3	721 aa		32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	MINPP1	Q9UNW1	487 aa		32.68	■■■□□ 2.82
PDCD4-205	ENST00000467574	FZD9	O00144	591 aa		32.67	■■■□□ 2.82
PDCD4-205	ENST00000467574	TBC1D16	Q8TBP0	767 aa		32.67	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms