RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 LAMB2P55268 1798 aa18.1■□□□□ 0.49
CCHCR1-211ENST00000467553 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
CCHCR1-211ENST00000467553 TRIM28Q13263 835 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-211ENST00000467553 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
CCHCR1-211ENST00000467553 USP50Q70EL3 339 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-211ENST00000467553 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 GRAPQ13588 217 aa18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 DPP8Q6V1X1 898 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 GRAPLQ8TC17 118 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 GJA3Q9Y6H8 435 aa18.09■□□□□ 0.49
CCHCR1-211ENST00000467553 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 TWISTNBQ3B726 338 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 MPNDQ8N594 471 aa18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
CCHCR1-211ENST00000467553 CDHR2Q9BYE9 1310 aa18.07■□□□□ 0.48
CCHCR1-211ENST00000467553 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
CCHCR1-211ENST00000467553 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-211ENST00000467553 MIER1Q8N108 512 aa18.07■□□□□ 0.48
CCHCR1-211ENST00000467553 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-211ENST00000467553 COL4A5P29400 1685 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 SCNN1DP51172 638 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 AOC3Q16853 763 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 COL13A1Q5TAT6 717 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-211ENST00000467553 TNIP1Q15025 636 aa18.05■□□□□ 0.48
CCHCR1-211ENST00000467553 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
CCHCR1-211ENST00000467553 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
CCHCR1-211ENST00000467553 ADARB2Q9NS39 739 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-211ENST00000467553 RASSF10A6NK89 507 aa18.04■□□□□ 0.48
CCHCR1-211ENST00000467553 MAP1SQ66K74 1059 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-211ENST00000467553 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
CCHCR1-211ENST00000467553 GPRC5DQ9NZD1 345 aa18.04■□□□□ 0.48
CCHCR1-211ENST00000467553 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 EPS15P42566 896 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 CXCL9Q07325 125 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
CCHCR1-211ENST00000467553 VAMP4O75379 141 aa18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 SLC4A2P04920 1241 aa18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 CIAPIN1Q6FI81 312 aa18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 TNS4Q8IZW8 715 aa18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
CCHCR1-211ENST00000467553 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 VEGFBP49765 207 aa18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 ZC3H15Q8WU90 426 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 AIDAQ96BJ3 306 aa18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
CCHCR1-211ENST00000467553 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
CCHCR1-211ENST00000467553 EYA3Q99504 573 aa18■□□□□ 0.47
CCHCR1-211ENST00000467553 MYD88Q99836 296 aa18■□□□□ 0.47
CCHCR1-211ENST00000467553 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
CCHCR1-211ENST00000467553 ZNF521Q96K83 1311 aa17.99■□□□□ 0.47
CCHCR1-211ENST00000467553 WASHC4Q2M389 1173 aa17.99■□□□□ 0.47
CCHCR1-211ENST00000467553 G2E3Q7L622 706 aa17.99■□□□□ 0.47
CCHCR1-211ENST00000467553 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
CCHCR1-211ENST00000467553 TAF1P21675 1872 aa17.99■□□□□ 0.47
CCHCR1-211ENST00000467553 ECE1P42892 770 aa17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 MAP2K1Q02750 393 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 DPF2Q92785 391 aa17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 ABT1Q9ULW3 272 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
CCHCR1-211ENST00000467553 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 H7C1D1 291 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 GMPSP49915 693 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 CELF1Q92879 486 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 WBP1LQ9NX94 342 aa17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-211ENST00000467553 E9PSI1 815 aa17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 RPS12P25398 132 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 CWC25Q9NXE8 425 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
CCHCR1-211ENST00000467553 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.46
CCHCR1-211ENST00000467553 PDE8AO60658 829 aa17.95■□□□□ 0.46
CCHCR1-211ENST00000467553 RAD17O75943 681 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms