RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 KIAA2012Q0VF49 1180 aa25.28■■□□□ 1.64
FAM53A-204ENST00000467215 FAM161AQ3B820 660 aa25.28■■□□□ 1.64
FAM53A-204ENST00000467215 NLRP10Q86W26 655 aa25.28■■□□□ 1.64
FAM53A-204ENST00000467215 VPS33BQ9H267 617 aa25.28■■□□□ 1.64
FAM53A-204ENST00000467215 RAD17O75943 681 aa25.27■■□□□ 1.64
FAM53A-204ENST00000467215 CIAPIN1Q6FI81 312 aa25.27■■□□□ 1.64
FAM53A-204ENST00000467215 MPNDQ8N594 471 aa25.27■■□□□ 1.64
FAM53A-204ENST00000467215 TRPM4Q8TD43 1214 aa25.27■■□□□ 1.64
FAM53A-204ENST00000467215 POLR2AP24928 1970 aaKnown RBP25.27■■□□□ 1.64
FAM53A-204ENST00000467215 AIMP1Q12904 312 aaKnown RBP25.26■■□□□ 1.63
FAM53A-204ENST00000467215 SAPCD2Q86UD0 394 aa25.26■■□□□ 1.63
FAM53A-204ENST00000467215 XAGE3Q8WTP9 111 aa25.26■■□□□ 1.63
FAM53A-204ENST00000467215 ZNF428Q96B54 188 aa25.26■■□□□ 1.63
FAM53A-204ENST00000467215 PNNQ9H307 717 aaKnown RBP25.26■■□□□ 1.63
FAM53A-204ENST00000467215 SHTN1A0MZ66 631 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 RIPK4P57078 832 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 GRAPQ13588 217 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 HSP90AB3PQ58FF7 597 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 COPS6Q7L5N1 327 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 SP8Q8IXZ3 490 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 GRAPLQ8TC17 118 aaPredicted RBP25.25■■□□□ 1.63
FAM53A-204ENST00000467215 BCL2L13Q9BXK5 485 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 ZNF408Q9H9D4 720 aa25.25■■□□□ 1.63
FAM53A-204ENST00000467215 SCN9AQ15858 1988 aa25.24■■□□□ 1.63
FAM53A-204ENST00000467215 HIRAP54198 1017 aaPredicted RBP25.24■■□□□ 1.63
FAM53A-204ENST00000467215 SH3TC1Q8TE82 1336 aa25.23■■□□□ 1.63
FAM53A-204ENST00000467215 YDJCA8MPS7 323 aa25.23■■□□□ 1.63
FAM53A-204ENST00000467215 BBOX1O75936 387 aa25.23■■□□□ 1.63
FAM53A-204ENST00000467215 KRT24Q2M2I5 525 aa25.23■■□□□ 1.63
FAM53A-204ENST00000467215 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
FAM53A-204ENST00000467215 TRMT112Q9UI30 125 aaKnown RBP25.23■■□□□ 1.63
FAM53A-204ENST00000467215 MAP2K2P36507 400 aa25.22■■□□□ 1.63
FAM53A-204ENST00000467215 PSME4Q14997 1843 aa25.21■■□□□ 1.63
FAM53A-204ENST00000467215 PGAP2Q9UHJ9 254 aa25.21■■□□□ 1.63
FAM53A-204ENST00000467215 CCDC85CA6NKD9 419 aa25.2■■□□□ 1.62
FAM53A-204ENST00000467215 TMPOP42166 694 aaKnown RBP25.2■■□□□ 1.62
FAM53A-204ENST00000467215 TCIRG1Q13488 830 aa25.2■■□□□ 1.62
FAM53A-204ENST00000467215 TNIP1Q15025 636 aa25.2■■□□□ 1.62
FAM53A-204ENST00000467215 BABAM1Q9NWV8 329 aa25.2■■□□□ 1.62
FAM53A-204ENST00000467215 LMOD3Q0VAK6 560 aa25.19■■□□□ 1.62
FAM53A-204ENST00000467215 MICALL2Q8IY33 904 aa25.19■■□□□ 1.62
FAM53A-204ENST00000467215 ZC3H15Q8WU90 426 aaKnown RBP25.18■■□□□ 1.62
FAM53A-204ENST00000467215 HHIPL1Q96JK4 782 aa25.18■■□□□ 1.62
FAM53A-204ENST00000467215 CHPF2Q9P2E5 772 aa25.18■■□□□ 1.62
FAM53A-204ENST00000467215 CNOT7Q9UIV1 285 aaKnown RBP25.18■■□□□ 1.62
FAM53A-204ENST00000467215 ZBTB12Q9Y330 459 aaPredicted RBP25.18■■□□□ 1.62
FAM53A-204ENST00000467215 BRPF1P55201 1214 aaPredicted RBP25.17■■□□□ 1.62
FAM53A-204ENST00000467215 DLK2Q6UY11 383 aa25.17■■□□□ 1.62
FAM53A-204ENST00000467215 DBNDD1Q9H9R9 158 aa25.17■■□□□ 1.62
FAM53A-204ENST00000467215 CDC37L1Q7L3B6 337 aa25.16■■□□□ 1.62
FAM53A-204ENST00000467215 CELF1Q92879 486 aaKnown RBP25.16■■□□□ 1.62
FAM53A-204ENST00000467215 AKAP11Q9UKA4 1901 aa25.16■■□□□ 1.62
FAM53A-204ENST00000467215 TMC4Q7Z404 712 aa25.15■■□□□ 1.62
FAM53A-204ENST00000467215 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
FAM53A-204ENST00000467215 ZIC5Q96T25 663 aa25.15■■□□□ 1.62
FAM53A-204ENST00000467215 MCOLN1Q9GZU1 580 aa25.15■■□□□ 1.62
FAM53A-204ENST00000467215 SPEF2Q9C093 1822 aa25.14■■□□□ 1.62
FAM53A-204ENST00000467215 PSMD14O00487 310 aa25.14■■□□□ 1.62
FAM53A-204ENST00000467215 CA12O43570 354 aa25.14■■□□□ 1.62
FAM53A-204ENST00000467215 H7C1D1 291 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 EGFRP00533 1210 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 SAMD7Q7Z3H4 446 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 USP48Q86UV5 1035 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 RTL9Q8NET4 1388 aa25.13■■□□□ 1.61
FAM53A-204ENST00000467215 HUNKP57058 714 aa25.12■■□□□ 1.61
FAM53A-204ENST00000467215 TBC1D10BQ4KMP7 808 aaPredicted RBP25.12■■□□□ 1.61
FAM53A-204ENST00000467215 HDGFL1Q5TGJ6 251 aa25.12■■□□□ 1.61
FAM53A-204ENST00000467215 FAM89AQ96GI7 184 aa25.12■■□□□ 1.61
FAM53A-204ENST00000467215 LAS1LQ9Y4W2 734 aaKnown RBP25.12■■□□□ 1.61
FAM53A-204ENST00000467215 ATP5J2-PTCD1G3V325 749 aa25.11■■□□□ 1.61
FAM53A-204ENST00000467215 RIMBP2O15034 1052 aa25.11■■□□□ 1.61
FAM53A-204ENST00000467215 MLLT1Q03111 559 aaPredicted RBP25.11■■□□□ 1.61
FAM53A-204ENST00000467215 WASHC4Q2M389 1173 aa25.11■■□□□ 1.61
FAM53A-204ENST00000467215 PLBD2Q8NHP8 589 aa25.11■■□□□ 1.61
FAM53A-204ENST00000467215 ISCA1Q9BUE6 129 aa25.11■■□□□ 1.61
FAM53A-204ENST00000467215 NSFL1CQ9UNZ2 370 aaKnown RBP25.11■■□□□ 1.61
FAM53A-204ENST00000467215 ADM5C9JUS6 153 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 CHL1O00533 1208 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 ECE2O60344 883 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 SLC34A2O95436 690 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 GPSM2P81274 684 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 NOGQ13253 232 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 RTL5Q5HYW3 569 aaPredicted RBP25.1■■□□□ 1.61
FAM53A-204ENST00000467215 DPF2Q92785 391 aa25.1■■□□□ 1.61
FAM53A-204ENST00000467215 ZNF646O15015 1829 aaPredicted RBP25.09■■□□□ 1.61
FAM53A-204ENST00000467215 SF3B3Q15393 1217 aaKnown RBP25.09■■□□□ 1.61
FAM53A-204ENST00000467215 CFAP44Q96MT7 982 aa25.09■■□□□ 1.61
FAM53A-204ENST00000467215 POLLQ9UGP5 575 aa25.09■■□□□ 1.61
FAM53A-204ENST00000467215 C6orf229H3BNL8 230 aa25.08■■□□□ 1.61
FAM53A-204ENST00000467215 RGS19P49795 217 aa25.08■■□□□ 1.61
FAM53A-204ENST00000467215 KRT26Q7Z3Y9 468 aa25.08■■□□□ 1.61
FAM53A-204ENST00000467215 KCNQ5Q9NR82 932 aa25.08■■□□□ 1.61
FAM53A-204ENST00000467215 TRIM35Q9UPQ4 493 aa25.08■■□□□ 1.61
FAM53A-204ENST00000467215 MYH3P11055 1940 aa25.08■■□□□ 1.6
FAM53A-204ENST00000467215 DGKZQ13574 1117 aa25.07■■□□□ 1.6
FAM53A-204ENST00000467215 RALBP1Q15311 655 aa25.07■■□□□ 1.6
FAM53A-204ENST00000467215 DOK7Q18PE1 504 aa25.07■■□□□ 1.6
FAM53A-204ENST00000467215 ANKRD13DQ6ZTN6 518 aa25.07■■□□□ 1.6
FAM53A-204ENST00000467215 GBA2Q9HCG7 927 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms