RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TBC1D9Q6ZT07 1266 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 ERVV-1B6SEH8 477 aa11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 SDSP20132 328 aa11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 HSPA1LP34931 641 aa11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
APOBEC1-202ENST00000467171 LOC102724428A0A0B4J2F2 783 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 SIK1P57059 783 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 UBE3BQ7Z3V4 1068 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 C22orf23Q9BZE7 217 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
APOBEC1-202ENST00000467171 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 SPNS2Q8IVW8 549 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
APOBEC1-202ENST00000467171 PALLDQ8WX93 1383 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 RGL2O15211 777 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 PCCAP05165 728 aaPredicted RBP11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 FOXO4P98177 505 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 ATRNO75882 1429 aa11.69□□□□□ -0.54
APOBEC1-202ENST00000467171 ERC2O15083 957 aa11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
APOBEC1-202ENST00000467171 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 SASH1O94885 1247 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 ITPK1Q13572 414 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 BECN1Q14457 450 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 ITGB4P16144 1822 aa11.67□□□□□ -0.54
APOBEC1-202ENST00000467171 AFF2P51816 1311 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 THSD7AQ9UPZ6 1657 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 KCNQ2O43526 872 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 CIAO1O76071 339 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 HLFQ16534 295 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 JARID2Q92833 1246 aaPredicted RBP11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 ARFGEF2Q9Y6D5 1785 aa11.66□□□□□ -0.54
APOBEC1-202ENST00000467171 REC8O95072 547 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 CSF1RP07333 972 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 AACSQ86V21 672 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 AK7Q96M32 723 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
APOBEC1-202ENST00000467171 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 CHMLP26374 656 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 TSHZ3Q63HK5 1081 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
APOBEC1-202ENST00000467171 TJP1Q07157 1748 aa11.63□□□□□ -0.55
APOBEC1-202ENST00000467171 EYA2O00167 538 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms