RNA–Protein interactions for RNA: ENST00000466996.5

LNP1-202, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5

Gene LNP1, Length 1,723 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-202ENST00000466996 LY75O60449 1722 aa12□□□□□ -0.49
LNP1-202ENST00000466996 GRM8O00222 908 aa12□□□□□ -0.49
LNP1-202ENST00000466996 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
LNP1-202ENST00000466996 AACSQ86V21 672 aa12□□□□□ -0.49
LNP1-202ENST00000466996 LINS1Q8NG48 757 aa12□□□□□ -0.49
LNP1-202ENST00000466996 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
LNP1-202ENST00000466996 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
LNP1-202ENST00000466996 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 DDX58O95786 925 aaKnown RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 BAG6P46379 1132 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 PTH1RQ03431 593 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 SYAP1Q96A49 352 aaPredicted RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
LNP1-202ENST00000466996 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
LNP1-202ENST00000466996 LIMCH1Q9UPQ0 1083 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
LNP1-202ENST00000466996 ZNF831Q5JPB2 1677 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 RREB1Q92766 1687 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 KCPQ6ZWJ8 1503 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 LARGE1O95461 756 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 CPA1P15085 419 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
LNP1-202ENST00000466996 PDIA6Q15084 440 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 SMARCC1Q92922 1105 aaPredicted RBP11.98□□□□□ -0.49
LNP1-202ENST00000466996 KCNB2Q92953 911 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 KAZALD1Q96I82 304 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
LNP1-202ENST00000466996 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 SLC27A3Q5K4L6 730 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 PRPF40BQ6NWY9 871 aaKnown RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 EVI5LQ96CN4 794 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 SASH1O94885 1247 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 ZNF790Q6PG37 636 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 PDRG1Q9NUG6 133 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
LNP1-202ENST00000466996 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.97□□□□□ -0.49
LNP1-202ENST00000466996 LOC102724428A0A0B4J2F2 783 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 IGKV5-2P06315 115 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 SIK1P57059 783 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.49
LNP1-202ENST00000466996 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
LNP1-202ENST00000466996 SLC39A6Q13433 755 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.49
LNP1-202ENST00000466996 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
LNP1-202ENST00000466996 HIP1O00291 1037 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 STX6O43752 255 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 PHF14O94880 888 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 F13A1P00488 732 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 SYT1P21579 422 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 MSNP26038 577 aaKnown RBP11.95□□□□□ -0.5
LNP1-202ENST00000466996 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 CCDC83Q8IWF9 413 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
LNP1-202ENST00000466996 CCDC8Q9H0W5 538 aaPredicted RBP11.95□□□□□ -0.5
LNP1-202ENST00000466996 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 RBM8AQ9Y5S9 174 aaKnown RBP11.95□□□□□ -0.5
LNP1-202ENST00000466996 NUP188Q5SRE5 1749 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 MED23Q9ULK4 1368 aa11.95□□□□□ -0.5
LNP1-202ENST00000466996 NEURL1BA8MQ27 555 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 ST3GAL1Q11201 340 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 ITPK1Q13572 414 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 CREB3L3Q68CJ9 461 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
LNP1-202ENST00000466996 ZSCAN31Q96LW9 406 aaPredicted RBP11.94□□□□□ -0.5
LNP1-202ENST00000466996 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 SNRKQ9NRH2 765 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 TJP1Q07157 1748 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 MYL6BP14649 208 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 GJB2P29033 226 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 CCDC183Q5T5S1 534 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 MYD88Q99836 296 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 SIL1Q9H173 461 aa11.94□□□□□ -0.5
LNP1-202ENST00000466996 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
LNP1-202ENST00000466996 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
LNP1-202ENST00000466996 A0A0D9SFI3 127 aa11.93□□□□□ -0.5
LNP1-202ENST00000466996 SLC27A2O14975 620 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms