RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 PRDM16Q9HAZ2 1276 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
SFXN3-204ENST00000466982 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
SFXN3-204ENST00000466982 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 CDC42BPGQ6DT37 1551 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
SFXN3-204ENST00000466982 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 JAKMIP1Q96N16 626 aaKnown RBP12.94□□□□□ -0.34
SFXN3-204ENST00000466982 ARHGAP29Q52LW3 1261 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
SFXN3-204ENST00000466982 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
SFXN3-204ENST00000466982 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
SFXN3-204ENST00000466982 IQCB1Q15051 598 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 PDRG1Q9NUG6 133 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
SFXN3-204ENST00000466982 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
SFXN3-204ENST00000466982 CHL1O00533 1208 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 PTH1RQ03431 593 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 BIRC2Q13490 618 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 IDI1Q13907 227 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 TTC31Q49AM3 519 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-204ENST00000466982 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
SFXN3-204ENST00000466982 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 TCEANC2Q96MN5 208 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 EPC1Q9H2F5 836 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
SFXN3-204ENST00000466982 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 TPCN1Q9ULQ1 816 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 GOLGA6L19H0YKK7 550 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 KIF3CO14782 793 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
SFXN3-204ENST00000466982 SRLQ86TD4 932 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-204ENST00000466982 ITFG2Q969R8 447 aa12.92□□□□□ -0.34
SFXN3-204ENST00000466982 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 KLHL33A6NCF5 533 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 CDC25BP30305 580 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 SNW1Q13573 536 aaKnown RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 ERCC4Q92889 916 aaPredicted RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 TRDNQ13061 729 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 NME9Q86XW9 330 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 L2HGDHQ9H9P8 463 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
SFXN3-204ENST00000466982 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 ELP1O95163 1332 aa12.91□□□□□ -0.34
SFXN3-204ENST00000466982 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 SUGP1Q8IWZ8 645 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
SFXN3-204ENST00000466982 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 ARID4AP29374 1257 aaPredicted RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
SFXN3-204ENST00000466982 E2F4Q16254 413 aa12.9□□□□□ -0.34
SFXN3-204ENST00000466982 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
SFXN3-204ENST00000466982 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
SFXN3-204ENST00000466982 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
SFXN3-204ENST00000466982 SASH3O75995 380 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
SFXN3-204ENST00000466982 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
SFXN3-204ENST00000466982 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
SFXN3-204ENST00000466982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.35
SFXN3-204ENST00000466982 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
SFXN3-204ENST00000466982 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
SFXN3-204ENST00000466982 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 NEMFO60524 1076 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 GNAI3P08754 354 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 MAP2K2P36507 400 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 SARM1Q6SZW1 724 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
SFXN3-204ENST00000466982 RRP15Q9Y3B9 282 aaKnown RBP12.88□□□□□ -0.35
SFXN3-204ENST00000466982 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
SFXN3-204ENST00000466982 STK3Q13188 491 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms