RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
ABCF3-206ENST00000466742 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.52
ABCF3-206ENST00000466742 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
ABCF3-206ENST00000466742 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
ABCF3-206ENST00000466742 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
ABCF3-206ENST00000466742 SPC24Q8NBT2 197 aa18.32■□□□□ 0.52
ABCF3-206ENST00000466742 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-206ENST00000466742 PTGS1P23219 599 aa18.32■□□□□ 0.52
ABCF3-206ENST00000466742 CUL4AQ13619 759 aa18.32■□□□□ 0.52
ABCF3-206ENST00000466742 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-206ENST00000466742 GUCY2CP25092 1073 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
ABCF3-206ENST00000466742 ERO1AQ96HE7 468 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-206ENST00000466742 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 ADAMTS2O95450 1211 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 PLCB2Q00722 1185 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 MEIS3Q99687 375 aa18.31■□□□□ 0.52
ABCF3-206ENST00000466742 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
ABCF3-206ENST00000466742 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
ABCF3-206ENST00000466742 TMX3Q96JJ7 454 aa18.3■□□□□ 0.52
ABCF3-206ENST00000466742 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
ABCF3-206ENST00000466742 KCNG1Q9UIX4 513 aa18.3■□□□□ 0.52
ABCF3-206ENST00000466742 MYO1CO00159 1063 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 MCM2P49736 904 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 SYT10Q6XYQ8 523 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 ZNF215Q9UL58 517 aaPredicted RBP18.29■□□□□ 0.52
ABCF3-206ENST00000466742 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
ABCF3-206ENST00000466742 TEX35Q5T0J7 233 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 CEP135Q66GS9 1140 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCF3-206ENST00000466742 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
ABCF3-206ENST00000466742 SHANK3Q9BYB0 1731 aa18.28■□□□□ 0.52
ABCF3-206ENST00000466742 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
ABCF3-206ENST00000466742 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
ABCF3-206ENST00000466742 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-206ENST00000466742 GDPD2Q9HCC8 539 aa18.27■□□□□ 0.52
ABCF3-206ENST00000466742 FHOD1Q9Y613 1164 aa18.27■□□□□ 0.52
ABCF3-206ENST00000466742 GNAI3P08754 354 aa18.27■□□□□ 0.51
ABCF3-206ENST00000466742 H2AFXP16104 143 aaPredicted RBP18.27■□□□□ 0.51
ABCF3-206ENST00000466742 PDIA6Q15084 440 aa18.27■□□□□ 0.51
ABCF3-206ENST00000466742 PROSER3Q2NL68 480 aa18.27■□□□□ 0.51
ABCF3-206ENST00000466742 CEP85Q6P2H3 762 aa18.27■□□□□ 0.51
ABCF3-206ENST00000466742 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.51
ABCF3-206ENST00000466742 THRAP3Q9Y2W1 955 aaKnown RBP18.27■□□□□ 0.51
ABCF3-206ENST00000466742 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 ANXA1P04083 346 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 TTC22Q5TAA0 569 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-206ENST00000466742 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-206ENST00000466742 ELF2Q15723 593 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-206ENST00000466742 KRBA2Q6ZNG9 492 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 CCDC186Q7Z3E2 898 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-206ENST00000466742 C10orf67Q8IYJ2 551 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 JCADQ9P266 1359 aa18.26■□□□□ 0.51
ABCF3-206ENST00000466742 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
ABCF3-206ENST00000466742 SLIT2O94813 1529 aa18.25■□□□□ 0.51
ABCF3-206ENST00000466742 ADCY9O60503 1353 aa18.25■□□□□ 0.51
ABCF3-206ENST00000466742 TRIM66O15016 1216 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 GNAI2P04899 355 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 PLA2G4AP47712 749 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 UBE2HP62256 183 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 ZSCAN25Q6NSZ9 544 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 SRCIN1Q9C0H9 1055 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 TMX1Q9H3N1 280 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-206ENST00000466742 PRR29P0C7W0 189 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 LRMPQ12912 555 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 NEK11Q8NG66 645 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 DCTPP1Q9H773 170 aa18.24■□□□□ 0.51
ABCF3-206ENST00000466742 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
ABCF3-206ENST00000466742 EXOC5O00471 708 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 GYS2P54840 703 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 TPM4P67936 248 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 KSR2Q6VAB6 950 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 TNS2Q63HR2 1409 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 N4BP2Q86UW6 1770 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-206ENST00000466742 GTF3C6Q969F1 213 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 CWC15Q9P013 229 aaKnown RBP18.23■□□□□ 0.51
ABCF3-206ENST00000466742 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
ABCF3-206ENST00000466742 GLI3P10071 1580 aa18.22■□□□□ 0.51
ABCF3-206ENST00000466742 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
ABCF3-206ENST00000466742 DDX58O95786 925 aaKnown RBP18.22■□□□□ 0.51
ABCF3-206ENST00000466742 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-206ENST00000466742 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
ABCF3-206ENST00000466742 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
ABCF3-206ENST00000466742 LCMT1Q9UIC8 334 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms