RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	TAF1	P21675	1872 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RTL9	Q8NET4	1388 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ALDH1L1	O75891	902 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	BBOX1	O75936	387 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	GRAP	Q13588	217 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	GRIPAP1	Q4V328	841 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CCDC93	Q567U6	631 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	GRAPL	Q8TC17	118 aa	Predicted RBP	12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	SMC4	Q9NTJ3	1288 aa		12.05	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	COL4A1	P02462	1669 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	LMNB1	P20700	586 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RASSF7	Q02833	373 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	DDX46	Q7L014	1031 aa	Known RBP	12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	TMC4	Q7Z404	712 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RTKN2	Q8IZC4	609 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ARHGAP45	Q92619	1136 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	PSMD1	Q99460	953 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	BCL2L13	Q9BXK5	485 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ATP6V0A2	Q9Y487	856 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	UTY	O14607	1347 aa		12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.04	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	PPEF1	O14829	653 aa	Predicted RBP	12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CTSW	P56202	376 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RTL5	Q5HYW3	569 aa	Predicted RBP	12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	C9orf131	Q5VYM1	1079 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	UBE3B	Q7Z3V4	1068 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	SP8	Q8IXZ3	490 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	SRCIN1	Q9C0H9	1055 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	TAOK3	Q9H2K8	898 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	LTBP1	Q14766	1721 aa		12.03	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	GRM8	O00222	908 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	CSF1R	P07333	972 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	CCDC152	Q4G0S7	254 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	OLFM4	Q6UX06	510 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	TTLL11	Q8NHH1	800 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	JARID2	Q92833	1246 aa	Predicted RBP	12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	KIF16B	Q96L93	1317 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	TIAM2	Q8IVF5	1701 aa		12.02	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	CELF1	Q92879	486 aa	Known RBP	12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	API5	Q9BZZ5	524 aa	Known RBP	12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	RNF181	Q9P0P0	153 aa		12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	NOB1	Q9ULX3	412 aa	Known RBP	12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	DUOX1	Q9NRD9	1551 aa		12.01	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	RPS8	P62241	208 aa	Known RBP	12	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	FOXO4	P98177	505 aa		12	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SLC4A10	Q6U841	1118 aa		12	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SLC51A	Q86UW1	340 aa		12	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	VPS33B	Q9H267	617 aa		12	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	BCAR3	O75815	825 aa		11.99	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	GREM2	Q9H772	168 aa		11.99	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SEC31B	Q9NQW1	1179 aa		11.99	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	CCT4	P50991	539 aa	Known RBP	11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	KAZALD1	Q96I82	304 aa		11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	USP44	Q9H0E7	712 aa		11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	PODXL2	Q9NZ53	605 aa		11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.98	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	COL4A5	P29400	1685 aa		11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	IPO8	O15397	1037 aa	Known RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	IARS	P41252	1262 aa	Known RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	RABL6	Q3YEC7	729 aa	Predicted RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	EPHA10	Q5JZY3	1008 aa		11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	INTS3	Q68E01	1043 aa	Known RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	ATF7IP	Q6VMQ6	1270 aa		11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	MPND	Q8N594	471 aa		11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	CDC5L	Q99459	802 aa	Known RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	TMX4	Q9H1E5	349 aa	Predicted RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.97	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SPEF2	Q9C093	1822 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	TRIM27	P14373	513 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	FAM161A	Q3B820	660 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	DPP8	Q6V1X1	898 aa	Predicted RBP	11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	ANKRD18A	Q8IVF6	992 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SUPT20H	Q8NEM7	779 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	SUCLG2	Q96I99	432 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	BSDC1	Q9NW68	430 aa	Predicted RBP	11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	WDR90	Q96KV7	1748 aa		11.96	□□□□□ -0.49
SDCCAG3-208	ENST00000466579	GLTPD2	A6NH11	291 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	FZD9	O00144	591 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	ITGA6	P23229	1130 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	GPSM2	P81274	684 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	LMBR1L	Q6UX01	489 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579		A0A1B0GUL6	1792 aa		11.95	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	KIAA2012	Q0VF49	1180 aa		11.94	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	ZKSCAN2	Q63HK3	967 aa		11.94	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	ANKRD44	Q8N8A2	993 aa		11.94	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	POLL	Q9UGP5	575 aa		11.94	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	KDM2B	Q8NHM5	1336 aa		11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	ANKRD18B	A2A2Z9	1011 aa		11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	IGHMBP2	P38935	993 aa	Known RBP	11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	IFIT5	Q13325	482 aa	Known RBP	11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	TBC1D16	Q8TBP0	767 aa		11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	BICC1	Q9H694	974 aa	Known RBP	11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.93	□□□□□ -0.5
SDCCAG3-208	ENST00000466579	MINPP1	Q9UNW1	487 aa		11.93	□□□□□ -0.5

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