RNA–Protein interactions for RNA: ENST00000466437.1

PDK1-209, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 4

Gene PDK1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-209ENST00000466437 NPR1P16066 1061 aa10.81□□□□□ -0.68
PDK1-209ENST00000466437 IARSP41252 1262 aaKnown RBP10.81□□□□□ -0.68
PDK1-209ENST00000466437 CST9Q5W186 159 aa10.81□□□□□ -0.68
PDK1-209ENST00000466437 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
PDK1-209ENST00000466437 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
PDK1-209ENST00000466437 DZIP3Q86Y13 1208 aaKnown RBP10.81□□□□□ -0.68
PDK1-209ENST00000466437 MCOLN1Q9GZU1 580 aa10.81□□□□□ -0.68
PDK1-209ENST00000466437 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
PDK1-209ENST00000466437 GPC2Q8N158 579 aa10.8□□□□□ -0.68
PDK1-209ENST00000466437 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
PDK1-209ENST00000466437 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
PDK1-209ENST00000466437 GPR101Q96P66 508 aaPredicted RBP10.8□□□□□ -0.68
PDK1-209ENST00000466437 GJA3Q9Y6H8 435 aa10.8□□□□□ -0.68
PDK1-209ENST00000466437 KLRG2A4D1S0 409 aaPredicted RBP10.79□□□□□ -0.68
PDK1-209ENST00000466437 FAM177BA6PVY3 158 aa10.79□□□□□ -0.68
PDK1-209ENST00000466437 EPS15P42566 896 aa10.79□□□□□ -0.68
PDK1-209ENST00000466437 SCNN1DP51172 638 aa10.79□□□□□ -0.68
PDK1-209ENST00000466437 BEGAINQ9BUH8 593 aa10.79□□□□□ -0.68
PDK1-209ENST00000466437 ABCC12Q96J65 1359 aa10.78□□□□□ -0.68
PDK1-209ENST00000466437 ECE1P42892 770 aa10.78□□□□□ -0.68
PDK1-209ENST00000466437 RTKN2Q8IZC4 609 aa10.78□□□□□ -0.68
PDK1-209ENST00000466437 TLL2Q9Y6L7 1015 aa10.78□□□□□ -0.68
PDK1-209ENST00000466437 COL3A1P02461 1466 aaPredicted RBP10.77□□□□□ -0.69
PDK1-209ENST00000466437 TEFQ10587 303 aa10.77□□□□□ -0.69
PDK1-209ENST00000466437 ARSIQ5FYB1 569 aa10.77□□□□□ -0.69
PDK1-209ENST00000466437 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
PDK1-209ENST00000466437 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
PDK1-209ENST00000466437 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
PDK1-209ENST00000466437 USP16Q9Y5T5 823 aa10.77□□□□□ -0.69
PDK1-209ENST00000466437 HSPA5P11021 654 aaKnown RBP10.76□□□□□ -0.69
PDK1-209ENST00000466437 DGKZQ13574 1117 aa10.76□□□□□ -0.69
PDK1-209ENST00000466437 ZIC5Q96T25 663 aa10.76□□□□□ -0.69
PDK1-209ENST00000466437 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDK1-209ENST00000466437 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
PDK1-209ENST00000466437 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 LMOD1P29536 600 aaPredicted RBP10.75□□□□□ -0.69
PDK1-209ENST00000466437 EIF6P56537 245 aaKnown RBP10.75□□□□□ -0.69
PDK1-209ENST00000466437 HLFQ16534 295 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
PDK1-209ENST00000466437 NPM2Q86SE8 214 aaKnown RBP10.75□□□□□ -0.69
PDK1-209ENST00000466437 SAPCD2Q86UD0 394 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 NBPF15Q8N660 670 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 JDP2Q8WYK2 163 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 PSMD1Q99460 953 aa10.75□□□□□ -0.69
PDK1-209ENST00000466437 GNAT3A8MTJ3 354 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 DIAPH1O60610 1272 aaKnown RBP10.74□□□□□ -0.69
PDK1-209ENST00000466437 CELF2O95319 508 aaKnown RBP10.74□□□□□ -0.69
PDK1-209ENST00000466437 MAP2K2P36507 400 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 SOX10P56693 466 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 CIAPIN1Q6FI81 312 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
PDK1-209ENST00000466437 KNSTRNQ9Y448 316 aa10.74□□□□□ -0.69
PDK1-209ENST00000466437 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
PDK1-209ENST00000466437 CRY2Q49AN0 593 aa10.73□□□□□ -0.69
PDK1-209ENST00000466437 TPTE2Q6XPS3 522 aa10.73□□□□□ -0.69
PDK1-209ENST00000466437 USP50Q70EL3 339 aaPredicted RBP10.73□□□□□ -0.69
PDK1-209ENST00000466437 NUTM1Q86Y26 1132 aa10.73□□□□□ -0.69
PDK1-209ENST00000466437 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
PDK1-209ENST00000466437 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■■■■□ 19.3
PDK1-209ENST00000466437 ZNF652Q9Y2D9 606 aa10.73□□□□□ -0.69
PDK1-209ENST00000466437 BTBD11A6QL63 1104 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 TCERG1O14776 1098 aaKnown RBP10.72□□□□□ -0.69
PDK1-209ENST00000466437 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
PDK1-209ENST00000466437 DLK2Q6UY11 383 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 RIC1Q4ADV7 1423 aa10.72□□□□□ -0.69
PDK1-209ENST00000466437 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
PDK1-209ENST00000466437 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
PDK1-209ENST00000466437 CA12O43570 354 aa10.71□□□□□ -0.69
PDK1-209ENST00000466437 NUP98P52948 1817 aa10.71□□□□□ -0.69
PDK1-209ENST00000466437 PHACTR3Q96KR7 559 aa10.71□□□□□ -0.69
PDK1-209ENST00000466437 GPRC5DQ9NZD1 345 aa10.71□□□□□ -0.69
PDK1-209ENST00000466437 NPC1L1Q9UHC9 1359 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 SHTN1A0MZ66 631 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
PDK1-209ENST00000466437 GMPSP49915 693 aaPredicted RBP10.7□□□□□ -0.7
PDK1-209ENST00000466437 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDK1-209ENST00000466437 AOC3Q16853 763 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 NIM1KQ8IY84 436 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 TRPM4Q8TD43 1214 aa10.7□□□□□ -0.7
PDK1-209ENST00000466437 ADARB2Q9NS39 739 aaKnown RBP10.7□□□□□ -0.7
PDK1-209ENST00000466437 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
PDK1-209ENST00000466437 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
PDK1-209ENST00000466437 PPIP5K2O43314 1243 aa10.69□□□□□ -0.7
PDK1-209ENST00000466437 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
PDK1-209ENST00000466437 HOXA10P31260 410 aaPredicted RBP10.69□□□□□ -0.7
PDK1-209ENST00000466437 HIRAP54198 1017 aaPredicted RBP10.69□□□□□ -0.7
PDK1-209ENST00000466437 LSM11P83369 360 aaKnown RBP eCLIP10.69□□□□□ -0.7
PDK1-209ENST00000466437 CXCL9Q07325 125 aa10.69□□□□□ -0.7
PDK1-209ENST00000466437 CC2D1BQ5T0F9 858 aaKnown RBP10.69□□□□□ -0.7
PDK1-209ENST00000466437 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
PDK1-209ENST00000466437 HHIPL1Q96JK4 782 aa10.69□□□□□ -0.7
PDK1-209ENST00000466437 GPTP24298 496 aa10.68□□□□□ -0.7
PDK1-209ENST00000466437 MCM10Q7L590 875 aa10.68□□□□□ -0.7
PDK1-209ENST00000466437 RPGRQ92834 1020 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms