RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 STAP2Q9UGK3 403 aa8.06□□□□□ -1.12
PSMB4-202ENST00000466425 LRRFIP2Q9Y608 721 aaKnown RBP8.06□□□□□ -1.12
PSMB4-202ENST00000466425 PI4KAP2A4QPH2 592 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 SDSP20132 328 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 MX1P20591 662 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 PTMSP20962 102 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 MCCP23508 829 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 HSPA1LP34931 641 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 PRSS12P56730 875 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 NEXNQ0ZGT2 675 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 ZNF790Q6PG37 636 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 LARP1Q6PKG0 1096 aaKnown RBP8.05□□□□□ -1.12
PSMB4-202ENST00000466425 BRINP3Q76B58 766 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 PI4KAP1Q8N8J0 262 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 LINS1Q8NG48 757 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 C9orf78Q9NZ63 289 aaPredicted RBP8.05□□□□□ -1.12
PSMB4-202ENST00000466425 CRYBG1Q9Y4K1 1723 aa8.05□□□□□ -1.12
PSMB4-202ENST00000466425 APBB1O00213 710 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 ERC2O15083 957 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
PSMB4-202ENST00000466425 SNRPA1P09661 255 aaKnown RBP8.04□□□□□ -1.12
PSMB4-202ENST00000466425 MTX1Q13505 466 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 PPP1R42Q7Z4L9 355 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 FMNL2Q96PY5 1086 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
PSMB4-202ENST00000466425 ANTXR1Q9H6X2 564 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 EXOC6BQ9Y2D4 811 aa8.04□□□□□ -1.12
PSMB4-202ENST00000466425 SOS2Q07890 1332 aaPredicted RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 LMO7Q8WWI1 1683 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 CAMTA1Q9Y6Y1 1673 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 PXDNQ92626 1479 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 JCADQ9P266 1359 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 SMAPO00193 183 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 KCNQ3O43525 872 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 ONECUT3O60422 494 aaPredicted RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 SURF6O75683 361 aaKnown RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 CABP4P57796 275 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 C16orf71Q8IYS4 520 aaPredicted RBP8.03□□□□□ -1.12
PSMB4-202ENST00000466425 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 TSKSQ9UJT2 592 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 MAP3K2Q9Y2U5 619 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 NWD2Q9ULI1 1742 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 PCDH11XQ9BZA7 1347 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 PCDH11YQ9BZA8 1340 aa8.03□□□□□ -1.12
PSMB4-202ENST00000466425 LTN1O94822 1766 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 ADCY9O60503 1353 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 ERVV-2B6SEH9 535 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 MCM2P49736 904 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
PSMB4-202ENST00000466425 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 ZCRB1Q8TBF4 217 aaKnown RBP8.02□□□□□ -1.13
PSMB4-202ENST00000466425 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 UTYO14607 1347 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 TTC41PQ6P2S7 1318 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 SALL3Q9BXA9 1300 aa8.02□□□□□ -1.13
PSMB4-202ENST00000466425 TESPA1A2RU30 521 aaPredicted RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 DDX11L8A8MPP1 907 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 GRM8O00222 908 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 ANAPC15P60006 121 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CHRNA2Q15822 529 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 TOM1L2Q6ZVM7 507 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 LAPTM4BQ86VI4 370 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CNTROBQ8N137 903 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CLASRPQ8N2M8 674 aaKnown RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CABLES1Q8TDN4 633 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 OTUD7AQ8TE49 926 aaPredicted RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 DDX17Q92841 729 aaKnown RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 ZFRQ96KR1 1074 aaKnown RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CARD10Q9BWT7 1032 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
PSMB4-202ENST00000466425 CWC22Q9HCG8 908 aaKnown RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
PSMB4-202ENST00000466425 PLCH1Q4KWH8 1693 aa8□□□□□ -1.13
PSMB4-202ENST00000466425 FAM208AQ9UK61 1670 aaKnown RBP8□□□□□ -1.13
PSMB4-202ENST00000466425 SOWAHBA6NEL2 793 aa8□□□□□ -1.13
PSMB4-202ENST00000466425 NBPF26B4DH59 902 aa8□□□□□ -1.13
PSMB4-202ENST00000466425 FRAT2O75474 233 aaPredicted RBP8□□□□□ -1.13
PSMB4-202ENST00000466425 ZMYND10O75800 440 aa8□□□□□ -1.13
PSMB4-202ENST00000466425 GLRX3O76003 335 aaKnown RBP8□□□□□ -1.13
PSMB4-202ENST00000466425 NBPF7P0C2Y1 421 aaPredicted RBP8□□□□□ -1.13
PSMB4-202ENST00000466425 IL2RBP14784 551 aa8□□□□□ -1.13
PSMB4-202ENST00000466425 G3BP1Q13283 466 aaKnown RBP eCLIP8□□□□□ -1.132e-6■■■□□ 15.7
PSMB4-202ENST00000466425 FAM98CQ17RN3 349 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms