RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CCDC85AQ96PX6 553 aaPredicted RBP15□□□□□ -0.01
VPS16-206ENST00000466415 SIL1Q9H173 461 aa15□□□□□ -0.01
VPS16-206ENST00000466415 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
VPS16-206ENST00000466415 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
VPS16-206ENST00000466415 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
VPS16-206ENST00000466415 COPRSQ9NQ92 184 aa14.99□□□□□ -0.01
VPS16-206ENST00000466415 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
VPS16-206ENST00000466415 DDX60Q8IY21 1712 aaKnown RBP14.98□□□□□ -0.01
VPS16-206ENST00000466415 ANKRD18BA2A2Z9 1011 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 SMARCA5O60264 1052 aaPredicted RBP14.98□□□□□ -0.01
VPS16-206ENST00000466415 CSF1RP07333 972 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 RFX5P48382 616 aaPredicted RBP14.98□□□□□ -0.01
VPS16-206ENST00000466415 ST5P78524 1137 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 CCDC152Q4G0S7 254 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 NLGN1Q8N2Q7 840 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 KLHDC4Q8TBB5 520 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 MYH3P11055 1940 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
VPS16-206ENST00000466415 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
VPS16-206ENST00000466415 PDE4AP27815 886 aa14.97□□□□□ -0.01
VPS16-206ENST00000466415 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
VPS16-206ENST00000466415 TTLL11Q8NHH1 800 aa14.97□□□□□ -0.01
VPS16-206ENST00000466415 RHPN1Q8TCX5 695 aa14.97□□□□□ -0.01
VPS16-206ENST00000466415 GREM2Q9H772 168 aa14.97□□□□□ -0.01
VPS16-206ENST00000466415 ITGA6P23229 1130 aa14.96□□□□□ -0.01
VPS16-206ENST00000466415 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
VPS16-206ENST00000466415 IL1RAPL2Q9NP60 686 aa14.96□□□□□ -0.01
VPS16-206ENST00000466415 SERPINB2P05120 415 aa14.95□□□□□ -0.02
VPS16-206ENST00000466415 SLC10A5Q5PT55 438 aa14.95□□□□□ -0.02
VPS16-206ENST00000466415 CLASRPQ8N2M8 674 aaKnown RBP14.95□□□□□ -0.02
VPS16-206ENST00000466415 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
VPS16-206ENST00000466415 EYA2O00167 538 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 TM4SF1P30408 202 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 IL15P40933 162 aaPredicted RBP14.94□□□□□ -0.02
VPS16-206ENST00000466415 MSL1Q68DK7 614 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 PARP3Q9Y6F1 533 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 RTL9Q8NET4 1388 aa14.94□□□□□ -0.02
VPS16-206ENST00000466415 RIC1Q4ADV7 1423 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
VPS16-206ENST00000466415 CIAO1O76071 339 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 IGHMBP2P38935 993 aaKnown RBP14.93□□□□□ -0.02
VPS16-206ENST00000466415 DDR1Q08345 913 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS16-206ENST00000466415 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 CDC5LQ99459 802 aaKnown RBP14.93□□□□□ -0.02
VPS16-206ENST00000466415 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
VPS16-206ENST00000466415 LRP5O75197 1615 aa14.92□□□□□ -0.02
VPS16-206ENST00000466415 SASH1O94885 1247 aa14.92□□□□□ -0.02
VPS16-206ENST00000466415 MMP10P09238 476 aa14.92□□□□□ -0.02
VPS16-206ENST00000466415 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
VPS16-206ENST00000466415 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
VPS16-206ENST00000466415 LDHAL6AQ6ZMR3 332 aa14.92□□□□□ -0.02
VPS16-206ENST00000466415 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
VPS16-206ENST00000466415 MPHOSPH8Q99549 860 aa14.92□□□□□ -0.02
VPS16-206ENST00000466415 TNRC6CQ9HCJ0 1690 aaKnown RBP14.91□□□□□ -0.02
VPS16-206ENST00000466415 MX1P20591 662 aa14.91□□□□□ -0.02
VPS16-206ENST00000466415 TFCP2Q12800 502 aa14.91□□□□□ -0.02
VPS16-206ENST00000466415 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
VPS16-206ENST00000466415 AACSQ86V21 672 aa14.91□□□□□ -0.02
VPS16-206ENST00000466415 METTL24Q5JXM2 366 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 DDX46Q7L014 1031 aaKnown RBP14.9□□□□□ -0.02
VPS16-206ENST00000466415 ATG9AQ7Z3C6 839 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 ANKRD18AQ8IVF6 992 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 PLEKHM2Q8IWE5 1019 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 OTUD7AQ8TE49 926 aaPredicted RBP14.9□□□□□ -0.02
VPS16-206ENST00000466415 RPGRQ92834 1020 aaKnown RBP14.9□□□□□ -0.02
VPS16-206ENST00000466415 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 CEP126Q9P2H0 1117 aa14.9□□□□□ -0.02
VPS16-206ENST00000466415 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
VPS16-206ENST00000466415 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
VPS16-206ENST00000466415 AOX1Q06278 1338 aa14.89□□□□□ -0.03
VPS16-206ENST00000466415 PDE1AP54750 535 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 TNNI3KQ59H18 835 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 SLC16A10Q8TF71 515 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 AKAP2Q9Y2D5 859 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 FPGT-TNNI3KV9GXZ4 949 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 ZNF609O15014 1411 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 MROH5Q6ZUA9 1318 aa14.88□□□□□ -0.03
VPS16-206ENST00000466415 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 ERC2O15083 957 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 CCDC8Q9H0W5 538 aaPredicted RBP14.87□□□□□ -0.03
VPS16-206ENST00000466415 GPR108Q9NPR9 543 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 TTC41PQ6P2S7 1318 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 SALL3Q9BXA9 1300 aa14.87□□□□□ -0.03
VPS16-206ENST00000466415 BMP2KLQ5H9B9 411 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 EAF2Q96CJ1 260 aaPredicted RBP14.86□□□□□ -0.03
VPS16-206ENST00000466415 RBM17Q96I25 401 aaKnown RBP14.86□□□□□ -0.03
VPS16-206ENST00000466415 NEUROD6Q96NK8 337 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 OSBPL3Q9H4L5 887 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 RIPOR2Q9Y4F9 1068 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 SPEF2Q9C093 1822 aa14.86□□□□□ -0.03
VPS16-206ENST00000466415 PDE6BP35913 854 aa14.85□□□□□ -0.03
VPS16-206ENST00000466415 GRAPQ13588 217 aa14.85□□□□□ -0.03
VPS16-206ENST00000466415 ATP2B3Q16720 1220 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 842.1 ms