RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
CHD3-207ENST00000466233 ADARB2Q9NS39 739 aaKnown RBP17.58■□□□□ 0.4
CHD3-207ENST00000466233 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
CHD3-207ENST00000466233 MKRN1Q9UHC7 482 aaKnown RBP17.58■□□□□ 0.4
CHD3-207ENST00000466233 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
CHD3-207ENST00000466233 CXCL9Q07325 125 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 TNIP1Q15025 636 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 AOC3Q16853 763 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 MAP1SQ66K74 1059 aaPredicted RBP17.57■□□□□ 0.4
CHD3-207ENST00000466233 ZC3H15Q8WU90 426 aaKnown RBP17.57■□□□□ 0.4
CHD3-207ENST00000466233 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
CHD3-207ENST00000466233 EPS15P42566 896 aa17.56■□□□□ 0.4
CHD3-207ENST00000466233 DEFB115Q30KQ5 88 aa17.56■□□□□ 0.4
CHD3-207ENST00000466233 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
CHD3-207ENST00000466233 TNS4Q8IZW8 715 aa17.56■□□□□ 0.4
CHD3-207ENST00000466233 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
CHD3-207ENST00000466233 VEGFBP49765 207 aa17.55■□□□□ 0.4
CHD3-207ENST00000466233 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
CHD3-207ENST00000466233 CIAPIN1Q6FI81 312 aa17.54■□□□□ 0.4
CHD3-207ENST00000466233 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
CHD3-207ENST00000466233 WBP1LQ9NX94 342 aa17.54■□□□□ 0.4
CHD3-207ENST00000466233 APAF1O14727 1248 aa17.53■□□□□ 0.4
CHD3-207ENST00000466233 MAP2K1Q02750 393 aaPredicted RBP17.53■□□□□ 0.4
CHD3-207ENST00000466233 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
CHD3-207ENST00000466233 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
CHD3-207ENST00000466233 DPF2Q92785 391 aa17.53■□□□□ 0.4
CHD3-207ENST00000466233 HHIPL1Q96JK4 782 aa17.53■□□□□ 0.4
CHD3-207ENST00000466233 ECE1P42892 770 aa17.52■□□□□ 0.4
CHD3-207ENST00000466233 CTCFP49711 727 aaPredicted RBP17.52■□□□□ 0.4
CHD3-207ENST00000466233 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
CHD3-207ENST00000466233 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.4
CHD3-207ENST00000466233 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
CHD3-207ENST00000466233 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
CHD3-207ENST00000466233 LTBP1Q14766 1721 aa17.52■□□□□ 0.39
CHD3-207ENST00000466233 LAMB2P55268 1798 aa17.51■□□□□ 0.39
CHD3-207ENST00000466233 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
CHD3-207ENST00000466233 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
CHD3-207ENST00000466233 DDX58O95786 925 aaKnown RBP17.51■□□□□ 0.39
CHD3-207ENST00000466233 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
CHD3-207ENST00000466233 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
CHD3-207ENST00000466233 EYA3Q99504 573 aa17.51■□□□□ 0.39
CHD3-207ENST00000466233 PODXL2Q9NZ53 605 aa17.51■□□□□ 0.39
CHD3-207ENST00000466233 WDR33Q9C0J8 1336 aaKnown RBP17.5■□□□□ 0.39
CHD3-207ENST00000466233 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
CHD3-207ENST00000466233 RPS12P25398 132 aaKnown RBP17.5■□□□□ 0.39
CHD3-207ENST00000466233 GMPSP49915 693 aaPredicted RBP17.5■□□□□ 0.39
CHD3-207ENST00000466233 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
CHD3-207ENST00000466233 FOXN1O15353 648 aa17.49■□□□□ 0.39
CHD3-207ENST00000466233 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
CHD3-207ENST00000466233 SLC51AQ86UW1 340 aa17.49■□□□□ 0.39
CHD3-207ENST00000466233 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
CHD3-207ENST00000466233 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
CHD3-207ENST00000466233 ABT1Q9ULW3 272 aaKnown RBP17.49■□□□□ 0.39
CHD3-207ENST00000466233 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
CHD3-207ENST00000466233 TLL2Q9Y6L7 1015 aa17.49■□□□□ 0.39
CHD3-207ENST00000466233 YDJCA8MPS7 323 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 H7C1D1 291 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 MAP2K2P36507 400 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 CST9Q5W186 159 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 METTL22Q9BUU2 404 aaPredicted RBP17.48■□□□□ 0.39
CHD3-207ENST00000466233 DUOX1Q9NRD9 1551 aa17.48■□□□□ 0.39
CHD3-207ENST00000466233 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
CHD3-207ENST00000466233 PDE8AO60658 829 aa17.47■□□□□ 0.39
CHD3-207ENST00000466233 RAD17O75943 681 aa17.47■□□□□ 0.39
CHD3-207ENST00000466233 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
CHD3-207ENST00000466233 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
CHD3-207ENST00000466233 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
CHD3-207ENST00000466233 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
CHD3-207ENST00000466233 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
CHD3-207ENST00000466233 POLLQ9UGP5 575 aa17.46■□□□□ 0.39
CHD3-207ENST00000466233 IL16Q14005 1332 aa17.46■□□□□ 0.38
CHD3-207ENST00000466233 SAPCD2Q86UD0 394 aa17.45■□□□□ 0.38
CHD3-207ENST00000466233 TBC1D16Q8TBP0 767 aa17.45■□□□□ 0.38
CHD3-207ENST00000466233 CAPNS2Q96L46 248 aa17.45■□□□□ 0.38
CHD3-207ENST00000466233 ZNF609O15014 1411 aa17.45■□□□□ 0.38
CHD3-207ENST00000466233 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
CHD3-207ENST00000466233 CA12O43570 354 aa17.44■□□□□ 0.38
CHD3-207ENST00000466233 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
CHD3-207ENST00000466233 GPSM2P81274 684 aa17.44■□□□□ 0.38
CHD3-207ENST00000466233 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
CHD3-207ENST00000466233 ZC3H12CQ9C0D7 883 aaKnown RBP17.44■□□□□ 0.38
CHD3-207ENST00000466233 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
CHD3-207ENST00000466233 TRAF5O00463 557 aa17.43■□□□□ 0.38
CHD3-207ENST00000466233 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
CHD3-207ENST00000466233 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
CHD3-207ENST00000466233 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
CHD3-207ENST00000466233 MYD88Q99836 296 aa17.43■□□□□ 0.38
CHD3-207ENST00000466233 TRPM7Q96QT4 1865 aa17.42■□□□□ 0.38
CHD3-207ENST00000466233 ELL2O00472 640 aaPredicted RBP17.42■□□□□ 0.38
CHD3-207ENST00000466233 PSMD14O00487 310 aa17.42■□□□□ 0.38
CHD3-207ENST00000466233 CELF2O95319 508 aaKnown RBP17.42■□□□□ 0.38
CHD3-207ENST00000466233 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
CHD3-207ENST00000466233 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
CHD3-207ENST00000466233 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
CHD3-207ENST00000466233 RTL9Q8NET4 1388 aa17.41■□□□□ 0.38
CHD3-207ENST00000466233 ECE2O60344 883 aa17.41■□□□□ 0.38
CHD3-207ENST00000466233 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms