RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-209	ENST00000465780	C3orf67	Q6ZVT6	689 aa		13.55	□□□□□ -0.24
RBBP4-209	ENST00000465780	C7orf43	Q8WVR3	580 aa		13.55	□□□□□ -0.24
RBBP4-209	ENST00000465780	GCKR	Q14397	625 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	CWF19L2	Q2TBE0	894 aa	Known RBP	13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	BEND3	Q5T5X7	828 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	CC2D2B	Q6DHV5	1058 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	SMC4	Q9NTJ3	1288 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	LTBP3	Q9NS15	1303 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780	CCDC88A	Q3V6T2	1871 aa		13.54	□□□□□ -0.24
RBBP4-209	ENST00000465780		F6X3S4	739 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780		H7C1W4	665 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	C21orf2	O43822	256 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	PDE8A	O60658	829 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	ALDH1L1	O75891	902 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	RARS	P54136	660 aa	Known RBP	13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	GRIPAP1	Q4V328	841 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	CCDC93	Q567U6	631 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	POTEH	Q6S545	545 aa		13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	DDX46	Q7L014	1031 aa	Known RBP	13.53	□□□□□ -0.24
RBBP4-209	ENST00000465780	DICER1	Q9UPY3	1922 aa	Known RBP	13.52	□□□□□ -0.24
RBBP4-209	ENST00000465780	BBOX1	O75936	387 aa		13.52	□□□□□ -0.25
RBBP4-209	ENST00000465780	RTL5	Q5HYW3	569 aa	Predicted RBP	13.52	□□□□□ -0.25
RBBP4-209	ENST00000465780	TMC4	Q7Z404	712 aa		13.52	□□□□□ -0.25
RBBP4-209	ENST00000465780	RTKN2	Q8IZC4	609 aa		13.52	□□□□□ -0.25
RBBP4-209	ENST00000465780	ABCC4	O15439	1325 aa		13.52	□□□□□ -0.25
RBBP4-209	ENST00000465780	KIF16B	Q96L93	1317 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	NFKBIE	O00221	500 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	GRAP	Q13588	217 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	GRAPL	Q8TC17	118 aa	Predicted RBP	13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	PLA2G12B	Q9BX93	195 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	BCL2L13	Q9BXK5	485 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	SRCIN1	Q9C0H9	1055 aa		13.51	□□□□□ -0.25
RBBP4-209	ENST00000465780	TAF1	P21675	1872 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	SNED1	Q8TER0	1413 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	PPEF1	O14829	653 aa	Predicted RBP	13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	LMNB1	P20700	586 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	CASP7	P55210	303 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	CCDC152	Q4G0S7	254 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	UBE3B	Q7Z3V4	1068 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	ARHGAP45	Q92619	1136 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	TAOK3	Q9H2K8	898 aa		13.5	□□□□□ -0.25
RBBP4-209	ENST00000465780	RTL9	Q8NET4	1388 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	CTSW	P56202	376 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	RASSF7	Q02833	373 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	C9orf131	Q5VYM1	1079 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	SLC4A10	Q6U841	1118 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	PSMD1	Q99460	953 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	API5	Q9BZZ5	524 aa	Known RBP	13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	TMX4	Q9H1E5	349 aa	Predicted RBP	13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	ATP6V0A2	Q9Y487	856 aa		13.49	□□□□□ -0.25
RBBP4-209	ENST00000465780	LRRC37A	A6NMS7	1700 aa		13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	GRM8	O00222	908 aa		13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	SP8	Q8IXZ3	490 aa		13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	JARID2	Q92833	1246 aa	Predicted RBP	13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	RNF181	Q9P0P0	153 aa		13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	NOB1	Q9ULX3	412 aa	Known RBP	13.48	□□□□□ -0.25
RBBP4-209	ENST00000465780	UTY	O14607	1347 aa		13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	SPDYE2B	A6NHP3	402 aa		13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	IPO8	O15397	1037 aa	Known RBP	13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	SPDYE6	P0CI01	402 aa		13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	SPDYE2	Q495Y8	402 aa		13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	TTLL11	Q8NHH1	800 aa		13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.47	□□□□□ -0.25
RBBP4-209	ENST00000465780	CSF1R	P07333	972 aa		13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	CCT4	P50991	539 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	RPS8	P62241	208 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	OLFM4	Q6UX06	510 aa		13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	CELF1	Q92879	486 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	CDC5L	Q99459	802 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	VPS33B	Q9H267	617 aa		13.46	□□□□□ -0.25
RBBP4-209	ENST00000465780	TIAM2	Q8IVF5	1701 aa		13.45	□□□□□ -0.26
RBBP4-209	ENST00000465780	PRELP	P51888	382 aa		13.45	□□□□□ -0.26
RBBP4-209	ENST00000465780	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-209	ENST00000465780	SEC31B	Q9NQW1	1179 aa		13.45	□□□□□ -0.26
RBBP4-209	ENST00000465780	BCAR3	O75815	825 aa		13.44	□□□□□ -0.26
RBBP4-209	ENST00000465780	ANKRD18A	Q8IVF6	992 aa		13.44	□□□□□ -0.26
RBBP4-209	ENST00000465780	SUPT20H	Q8NEM7	779 aa		13.44	□□□□□ -0.26
RBBP4-209	ENST00000465780	IARS	P41252	1262 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	FOXO4	P98177	505 aa		13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	DPP8	Q6V1X1	898 aa	Predicted RBP	13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	ATF7IP	Q6VMQ6	1270 aa		13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	MPND	Q8N594	471 aa		13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	GREM2	Q9H772	168 aa		13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	COL4A1	P02462	1669 aa		13.43	□□□□□ -0.26
RBBP4-209	ENST00000465780	LTBP1	Q14766	1721 aa		13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	ZKSCAN2	Q63HK3	967 aa		13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	INTS3	Q68E01	1043 aa	Known RBP	13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	USP44	Q9H0E7	712 aa		13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	BSDC1	Q9NW68	430 aa	Predicted RBP	13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	PODXL2	Q9NZ53	605 aa		13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	HDAC5	Q9UQL6	1122 aa		13.42	□□□□□ -0.26
RBBP4-209	ENST00000465780	TRIM27	P14373	513 aa		13.41	□□□□□ -0.26
RBBP4-209	ENST00000465780	ITGA6	P23229	1130 aa		13.41	□□□□□ -0.26
RBBP4-209	ENST00000465780	IGHMBP2	P38935	993 aa	Known RBP	13.41	□□□□□ -0.26

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