RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 GRM8O00222 908 aa15.66■□□□□ 0.1
CHPF2-202ENST00000465601 IPO8O15397 1037 aaKnown RBP15.66■□□□□ 0.1
CHPF2-202ENST00000465601 RASSF7Q02833 373 aa15.66■□□□□ 0.1
CHPF2-202ENST00000465601 SLC51AQ86UW1 340 aa15.66■□□□□ 0.1
CHPF2-202ENST00000465601 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
CHPF2-202ENST00000465601 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
CHPF2-202ENST00000465601 NFKBIEO00221 500 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
CHPF2-202ENST00000465601 BBOX1O75936 387 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 YY1P25490 414 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 CTSWP56202 376 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 GRAPQ13588 217 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 SOGA3Q5TF21 947 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 TTLL11Q8NHH1 800 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
CHPF2-202ENST00000465601 CELF1Q92879 486 aaKnown RBP15.65■□□□□ 0.1
CHPF2-202ENST00000465601 PLA2G12BQ9BX93 195 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
CHPF2-202ENST00000465601 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
CHPF2-202ENST00000465601 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
CHPF2-202ENST00000465601 TRIM27P14373 513 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
CHPF2-202ENST00000465601 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
CHPF2-202ENST00000465601 ZKSCAN2Q63HK3 967 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 USP44Q9H0E7 712 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 GREM2Q9H772 168 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 ATP6V0A2Q9Y487 856 aa15.63■□□□□ 0.09
CHPF2-202ENST00000465601 CSF1RP07333 972 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 PRELPP51888 382 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 FOXO4P98177 505 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 EPHA10Q5JZY3 1008 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 TMX4Q9H1E5 349 aaPredicted RBP15.62■□□□□ 0.09
CHPF2-202ENST00000465601 TAOK3Q9H2K8 898 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 COL4A1P02462 1669 aa15.62■□□□□ 0.09
CHPF2-202ENST00000465601 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
CHPF2-202ENST00000465601 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
CHPF2-202ENST00000465601 RCAN3Q9UKA8 241 aa15.61■□□□□ 0.09
CHPF2-202ENST00000465601 UTYO14607 1347 aa15.61■□□□□ 0.09
CHPF2-202ENST00000465601 LMNB1P20700 586 aa15.6■□□□□ 0.09
CHPF2-202ENST00000465601 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
CHPF2-202ENST00000465601 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
CHPF2-202ENST00000465601 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
CHPF2-202ENST00000465601 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
CHPF2-202ENST00000465601 KAZALD1Q96I82 304 aa15.6■□□□□ 0.09
CHPF2-202ENST00000465601 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
CHPF2-202ENST00000465601 ITGA6P23229 1130 aa15.59■□□□□ 0.09
CHPF2-202ENST00000465601 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
CHPF2-202ENST00000465601 ANKRD18AQ8IVF6 992 aa15.59■□□□□ 0.09
CHPF2-202ENST00000465601 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
CHPF2-202ENST00000465601 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
CHPF2-202ENST00000465601 LTBP3Q9NS15 1303 aa15.59■□□□□ 0.09
CHPF2-202ENST00000465601 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
CHPF2-202ENST00000465601 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
CHPF2-202ENST00000465601 MPNDQ8N594 471 aa15.58■□□□□ 0.08
CHPF2-202ENST00000465601 SPEF2Q9C093 1822 aa15.58■□□□□ 0.08
CHPF2-202ENST00000465601 RTL9Q8NET4 1388 aa15.58■□□□□ 0.08
CHPF2-202ENST00000465601 SNED1Q8TER0 1413 aa15.58■□□□□ 0.08
CHPF2-202ENST00000465601 ANKRD18BA2A2Z9 1011 aa15.57■□□□□ 0.08
CHPF2-202ENST00000465601 DPP8Q6V1X1 898 aaPredicted RBP15.57■□□□□ 0.08
CHPF2-202ENST00000465601 TMEM57Q8N5G2 664 aa15.57■□□□□ 0.08
CHPF2-202ENST00000465601 PSMD1Q99460 953 aa15.57■□□□□ 0.08
CHPF2-202ENST00000465601 BICC1Q9H694 974 aaKnown RBP15.57■□□□□ 0.08
CHPF2-202ENST00000465601 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
CHPF2-202ENST00000465601 PLIN1O60240 522 aa15.56■□□□□ 0.08
CHPF2-202ENST00000465601 UBTFL1P0CB47 393 aaPredicted RBP15.56■□□□□ 0.08
CHPF2-202ENST00000465601 RLBP1P12271 317 aa15.56■□□□□ 0.08
CHPF2-202ENST00000465601 IGHMBP2P38935 993 aaKnown RBP15.56■□□□□ 0.08
CHPF2-202ENST00000465601 GPSM2P81274 684 aa15.56■□□□□ 0.08
CHPF2-202ENST00000465601 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
CHPF2-202ENST00000465601 FTSJ3Q8IY81 847 aaKnown RBP15.56■□□□□ 0.08
CHPF2-202ENST00000465601 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
CHPF2-202ENST00000465601 ANKRD44Q8N8A2 993 aa15.56■□□□□ 0.08
CHPF2-202ENST00000465601 MEIS3Q99687 375 aa15.56■□□□□ 0.08
CHPF2-202ENST00000465601 IARSP41252 1262 aaKnown RBP15.55■□□□□ 0.08
CHPF2-202ENST00000465601 CCDC57Q2TAC2 916 aa15.55■□□□□ 0.08
CHPF2-202ENST00000465601 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
CHPF2-202ENST00000465601 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
CHPF2-202ENST00000465601 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
CHPF2-202ENST00000465601 LRRC37AA6NMS7 1700 aa15.54■□□□□ 0.08
CHPF2-202ENST00000465601 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
CHPF2-202ENST00000465601 ZNF784Q8NCA9 323 aaPredicted RBP15.54■□□□□ 0.08
CHPF2-202ENST00000465601 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
CHPF2-202ENST00000465601 ZNF526Q8TF50 670 aaPredicted RBP15.54■□□□□ 0.08
CHPF2-202ENST00000465601 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
CHPF2-202ENST00000465601 ANKIB1Q9P2G1 1089 aa15.54■□□□□ 0.08
CHPF2-202ENST00000465601 MINPP1Q9UNW1 487 aa15.54■□□□□ 0.08
CHPF2-202ENST00000465601 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
CHPF2-202ENST00000465601 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
CHPF2-202ENST00000465601 GNAI3P08754 354 aa15.53■□□□□ 0.08
CHPF2-202ENST00000465601 TAF7LQ5H9L4 462 aa15.53■□□□□ 0.08
CHPF2-202ENST00000465601 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
CHPF2-202ENST00000465601 POLLQ9UGP5 575 aa15.53■□□□□ 0.08
CHPF2-202ENST00000465601 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms