RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 ATP8B2P98198 1209 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 AIMP1Q12904 312 aaKnown RBP10.28□□□□□ -0.76
UBE4B-205ENST00000465408 PDIA6Q15084 440 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MAP1SQ66K74 1059 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-205ENST00000465408 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 CNTROBQ8N137 903 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 HYPKQ9NX55 129 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MAP3K2Q9Y2U5 619 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 GYS1P13807 737 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-205ENST00000465408 FMR1Q06787 632 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBE4B-205ENST00000465408 ERFEQ4G0M1 354 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 BMP2KLQ5H9B9 411 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 KSR2Q6VAB6 950 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 FMNL2Q96PY5 1086 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
UBE4B-205ENST00000465408 DDX21Q9NR30 783 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBE4B-205ENST00000465408 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-205ENST00000465408 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 EXOC6BQ9Y2D4 811 aa10.27□□□□□ -0.77
UBE4B-205ENST00000465408 IQCA1LA6NCM1 817 aa10.26□□□□□ -0.77
UBE4B-205ENST00000465408 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
UBE4B-205ENST00000465408 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
UBE4B-205ENST00000465408 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
UBE4B-205ENST00000465408 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
UBE4B-205ENST00000465408 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
UBE4B-205ENST00000465408 ITPK1Q13572 414 aa10.25□□□□□ -0.77
UBE4B-205ENST00000465408 CWF19L2Q2TBE0 894 aaKnown RBP10.25□□□□□ -0.77
UBE4B-205ENST00000465408 TBC1D32Q96NH3 1257 aa10.25□□□□□ -0.77
UBE4B-205ENST00000465408 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
UBE4B-205ENST00000465408 SCN4AP35499 1836 aa10.25□□□□□ -0.77
UBE4B-205ENST00000465408 DICER1Q9UPY3 1922 aaKnown RBP10.25□□□□□ -0.77
UBE4B-205ENST00000465408 ERVV-2B6SEH9 535 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 ALDH1L1O75891 902 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 DDX58O95786 925 aaKnown RBP10.24□□□□□ -0.77
UBE4B-205ENST00000465408 DDR1Q08345 913 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-205ENST00000465408 TTC22Q5TAA0 569 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 CIAPIN1Q6FI81 312 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-205ENST00000465408 UNC80Q8N2C7 3258 aa10.24□□□□□ -0.77
UBE4B-205ENST00000465408 IBTKQ9P2D0 1353 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-205ENST00000465408 CDC45O75419 566 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 POLA2Q14181 598 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 TBC1D9Q6ZT07 1266 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 SSH3Q8TE77 659 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 MYD88Q99836 296 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 C22orf23Q9BZE7 217 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 C9orf78Q9NZ63 289 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-205ENST00000465408 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-205ENST00000465408 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
UBE4B-205ENST00000465408 LOC102724428A0A0B4J2F2 783 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 SRGAP3O43295 1099 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 SIK1P57059 783 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 TRAPPC3LQ5T215 181 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 CST9Q5W186 159 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 LRP10Q7Z4F1 713 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 LINS1Q8NG48 757 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
UBE4B-205ENST00000465408 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-205ENST00000465408 SUCLG2Q96I99 432 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 LRRCC1Q9C099 1032 aa10.22□□□□□ -0.77
UBE4B-205ENST00000465408 RANBP2P49792 3224 aaKnown RBP10.21□□□□□ -0.77
UBE4B-205ENST00000465408 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
UBE4B-205ENST00000465408 NPM3O75607 178 aaKnown RBP10.21□□□□□ -0.77
UBE4B-205ENST00000465408 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
UBE4B-205ENST00000465408 IGKV5-2P06315 115 aa10.21□□□□□ -0.77
UBE4B-205ENST00000465408 SDSP20132 328 aa10.21□□□□□ -0.77
UBE4B-205ENST00000465408 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
UBE4B-205ENST00000465408 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.77
UBE4B-205ENST00000465408 TMOD3Q9NYL9 352 aa10.21□□□□□ -0.77
UBE4B-205ENST00000465408 CACNA1FO60840 1977 aa10.21□□□□□ -0.78
UBE4B-205ENST00000465408 NEURL1BA8MQ27 555 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 GRM8O00222 908 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 EPHX2P34913 555 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 PDE1AP54750 535 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
UBE4B-205ENST00000465408 CTU1Q7Z7A3 348 aaKnown RBP10.2□□□□□ -0.78
UBE4B-205ENST00000465408 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-205ENST00000465408 ZIC5Q96T25 663 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 METTL22Q9BUU2 404 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-205ENST00000465408 SALL3Q9BXA9 1300 aa10.2□□□□□ -0.78
UBE4B-205ENST00000465408 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
UBE4B-205ENST00000465408 DLEC1Q9Y238 1755 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 RAB11FIP3O75154 756 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 A1BGP04217 495 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 NEXNQ0ZGT2 675 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 BECN1Q14457 450 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 NBR1Q14596 966 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 TTLL6Q8N841 843 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms