RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NFKB1P19838 968 aa10.9□□□□□ -0.66
PTCD3-205ENST00000464541 XKR5Q6UX68 686 aa10.9□□□□□ -0.66
PTCD3-205ENST00000464541 ENAMQ9NRM1 1142 aa10.9□□□□□ -0.66
PTCD3-205ENST00000464541 BRPF3Q9ULD4 1205 aa10.9□□□□□ -0.66
PTCD3-205ENST00000464541 EPXP11678 715 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
PTCD3-205ENST00000464541 PCSK7Q16549 785 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 LYPD4Q6UWN0 246 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 MDFIQ99750 246 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 POLIQ9UNA4 740 aa10.89□□□□□ -0.67
PTCD3-205ENST00000464541 SASH3O75995 380 aa10.88□□□□□ -0.67
PTCD3-205ENST00000464541 RARAP10276 462 aa10.88□□□□□ -0.67
PTCD3-205ENST00000464541 RAB44Q7Z6P3 723 aaPredicted RBP10.88□□□□□ -0.67
PTCD3-205ENST00000464541 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
PTCD3-205ENST00000464541 GJD3Q8N144 294 aa10.88□□□□□ -0.67
PTCD3-205ENST00000464541 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
PTCD3-205ENST00000464541 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
PTCD3-205ENST00000464541 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
PTCD3-205ENST00000464541 TARSP26639 723 aaKnown RBP10.87□□□□□ -0.67
PTCD3-205ENST00000464541 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
PTCD3-205ENST00000464541 ELOA3Q8NG57 546 aa10.87□□□□□ -0.67
PTCD3-205ENST00000464541 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
PTCD3-205ENST00000464541 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
PTCD3-205ENST00000464541 HOXD8P13378 290 aaPredicted RBP10.86□□□□□ -0.67
PTCD3-205ENST00000464541 SOX18P35713 384 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 KRT25Q7Z3Z0 450 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 GALNT6Q8NCL4 622 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 TLR7Q9NYK1 1049 aaKnown RBP10.86□□□□□ -0.67
PTCD3-205ENST00000464541 ZFATQ9P243 1243 aa10.86□□□□□ -0.67
PTCD3-205ENST00000464541 FAM181BA6NEQ2 426 aa10.85□□□□□ -0.67
PTCD3-205ENST00000464541 ARHGEF15O94989 841 aa10.85□□□□□ -0.67
PTCD3-205ENST00000464541 ALAS2P22557 587 aa10.85□□□□□ -0.67
PTCD3-205ENST00000464541 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
PTCD3-205ENST00000464541 ZNF438Q7Z4V0 828 aa10.85□□□□□ -0.67
PTCD3-205ENST00000464541 NRLP54845 237 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 C8orf34Q49A92 452 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 C1orf229Q6ZS94 237 aaPredicted RBP10.84□□□□□ -0.67
PTCD3-205ENST00000464541 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCD3-205ENST00000464541 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 RBCK1Q9BYM8 510 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 UBE2OQ9C0C9 1292 aaKnown RBP10.84□□□□□ -0.67
PTCD3-205ENST00000464541 GGNBP2Q9H3C7 697 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 ABI2Q9NYB9 513 aaPredicted RBP10.84□□□□□ -0.67
PTCD3-205ENST00000464541 DCTN4Q9UJW0 460 aa10.84□□□□□ -0.67
PTCD3-205ENST00000464541 PSAPP07602 524 aa10.83□□□□□ -0.68
PTCD3-205ENST00000464541 ADH7P40394 386 aa10.83□□□□□ -0.68
PTCD3-205ENST00000464541 TTC39BQ5VTQ0 682 aaPredicted RBP10.83□□□□□ -0.68
PTCD3-205ENST00000464541 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
PTCD3-205ENST00000464541 MMP20O60882 483 aa10.82□□□□□ -0.68
PTCD3-205ENST00000464541 GPLD1P80108 840 aa10.82□□□□□ -0.68
PTCD3-205ENST00000464541 PLAURQ03405 335 aa10.82□□□□□ -0.68
PTCD3-205ENST00000464541 OR13H1Q8NG92 308 aa10.82□□□□□ -0.68
PTCD3-205ENST00000464541 FAM129BQ96TA1 746 aa10.82□□□□□ -0.68
PTCD3-205ENST00000464541 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
PTCD3-205ENST00000464541 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
PTCD3-205ENST00000464541 STK17AQ9UEE5 414 aa10.81□□□□□ -0.68
PTCD3-205ENST00000464541 SHISA8B8ZZ34 492 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 NEFLP07196 543 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 NEDD1Q8NHV4 660 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 DMRTB1Q96MA1 342 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 SLC6A14Q9UN76 642 aa10.8□□□□□ -0.68
PTCD3-205ENST00000464541 CHSY3Q70JA7 882 aa10.79□□□□□ -0.68
PTCD3-205ENST00000464541 SNX29Q8TEQ0 813 aa10.79□□□□□ -0.68
PTCD3-205ENST00000464541 TMEM63CQ9P1W3 806 aa10.79□□□□□ -0.68
PTCD3-205ENST00000464541 IGFLR1Q9H665 355 aa10.78□□□□□ -0.68
PTCD3-205ENST00000464541 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 TNFRSF21O75509 655 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 AMPD1P23109 780 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 MAPK1P28482 360 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 ALKBH8Q96BT7 664 aaKnown RBP10.77□□□□□ -0.69
PTCD3-205ENST00000464541 FRRS1LQ9P0K9 344 aa10.77□□□□□ -0.69
PTCD3-205ENST00000464541 A6NHS1 94 aa10.76□□□□□ -0.69
PTCD3-205ENST00000464541 HYAL2Q12891 473 aa10.76□□□□□ -0.69
PTCD3-205ENST00000464541 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
PTCD3-205ENST00000464541 ZBTB42B2RXF5 422 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 PHACTR2O75167 634 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 KIF4AO95239 1232 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 IGHA2P01877 340 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 MARSP56192 900 aaKnown RBP10.75□□□□□ -0.69
PTCD3-205ENST00000464541 TMC1Q8TDI8 760 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 GZF1Q9H116 711 aaPredicted RBP10.75□□□□□ -0.69
PTCD3-205ENST00000464541 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 ADAMTS8Q9UP79 889 aa10.75□□□□□ -0.69
PTCD3-205ENST00000464541 LOC102724428A0A0B4J2F2 783 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 PIK3R2O00459 728 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 CES1P23141 567 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 SIK1P57059 783 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 FAM35AQ86V20 835 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 RBSNQ9H1K0 784 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 STARD13Q9Y3M8 1113 aa10.74□□□□□ -0.69
PTCD3-205ENST00000464541 DGKGP49619 791 aa10.73□□□□□ -0.69
PTCD3-205ENST00000464541 TMC7Q7Z402 723 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms