RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RAB44Q7Z6P3 723 aaPredicted RBP7.44□□□□□ -1.22
CLK1-208ENST00000464454 TNFRSF25Q93038 417 aa7.44□□□□□ -1.22
CLK1-208ENST00000464454 NUDT16Q96DE0 195 aaKnown RBP7.44□□□□□ -1.22
CLK1-208ENST00000464454 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
CLK1-208ENST00000464454 NDUFB5O43674 189 aa7.43□□□□□ -1.22
CLK1-208ENST00000464454 RARAP10276 462 aa7.43□□□□□ -1.22
CLK1-208ENST00000464454 EHHADHQ08426 723 aa7.43□□□□□ -1.22
CLK1-208ENST00000464454 PDE12Q6L8Q7 609 aaKnown RBP7.43□□□□□ -1.22
CLK1-208ENST00000464454 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
CLK1-208ENST00000464454 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
CLK1-208ENST00000464454 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
CLK1-208ENST00000464454 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
CLK1-208ENST00000464454 ADARB2-AS1A8MUL3 147 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 EPXP11678 715 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 ALAS2P22557 587 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 TRIP4Q15650 581 aaPredicted RBP7.42□□□□□ -1.22
CLK1-208ENST00000464454 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 UBE2OQ9C0C9 1292 aaKnown RBP7.42□□□□□ -1.22
CLK1-208ENST00000464454 BIN2Q9UBW5 565 aaPredicted RBP7.42□□□□□ -1.22
CLK1-208ENST00000464454 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
CLK1-208ENST00000464454 FZD6O60353 706 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 SASH3O75995 380 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 ARHGAP4P98171 946 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 WHAMMQ8TF30 809 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 CITED4Q96RK1 184 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
CLK1-208ENST00000464454 PSAPP07602 524 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
CLK1-208ENST00000464454 ADH7P40394 386 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.22
CLK1-208ENST00000464454 ZNF438Q7Z4V0 828 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 ZFATQ9P243 1243 aa7.4□□□□□ -1.22
CLK1-208ENST00000464454 AMPD1P23109 780 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 SOX18P35713 384 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 ECM1Q16610 540 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 TTC39BQ5VTQ0 682 aaPredicted RBP7.39□□□□□ -1.23
CLK1-208ENST00000464454 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 GJD3Q8N144 294 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 MDFIQ99750 246 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 CCDC87Q9NVE4 849 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 ABI2Q9NYB9 513 aaPredicted RBP7.39□□□□□ -1.23
CLK1-208ENST00000464454 TLR7Q9NYK1 1049 aaKnown RBP7.39□□□□□ -1.23
CLK1-208ENST00000464454 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
CLK1-208ENST00000464454 ARHGEF15O94989 841 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 NRLP54845 237 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 GPLD1P80108 840 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 PLAURQ03405 335 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
CLK1-208ENST00000464454 TMEM151AQ8N4L1 468 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 IGFLR1Q9H665 355 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 DNAJB12Q9NXW2 375 aaKnown RBP7.38□□□□□ -1.23
CLK1-208ENST00000464454 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
CLK1-208ENST00000464454 SHISA8B8ZZ34 492 aa7.37□□□□□ -1.23
CLK1-208ENST00000464454 MMP20O60882 483 aa7.37□□□□□ -1.23
CLK1-208ENST00000464454 HOXD8P13378 290 aaPredicted RBP7.37□□□□□ -1.23
CLK1-208ENST00000464454 SUZ12Q15022 739 aaKnown RBP7.37□□□□□ -1.23
CLK1-208ENST00000464454 CHSY3Q70JA7 882 aa7.37□□□□□ -1.23
CLK1-208ENST00000464454 BTBD6Q96KE9 485 aa7.37□□□□□ -1.23
CLK1-208ENST00000464454 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
CLK1-208ENST00000464454 PHF20L1A8MW92 1017 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 PIK3R2O00459 728 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 NEFLP07196 543 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLK1-208ENST00000464454 PODNQ7Z5L7 613 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 OR13H1Q8NG92 308 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 SNX29Q8TEQ0 813 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 PMEPA1Q969W9 287 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 RBCK1Q9BYM8 510 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 GGNBP2Q9H3C7 697 aa7.36□□□□□ -1.23
CLK1-208ENST00000464454 MARSP56192 900 aaKnown RBP7.35□□□□□ -1.23
CLK1-208ENST00000464454 TMC1Q8TDI8 760 aa7.35□□□□□ -1.23
CLK1-208ENST00000464454 DMRTB1Q96MA1 342 aa7.35□□□□□ -1.23
CLK1-208ENST00000464454 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
CLK1-208ENST00000464454 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
CLK1-208ENST00000464454 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
CLK1-208ENST00000464454 MAPK1P28482 360 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 HYAL2Q12891 473 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 FAM129BQ96TA1 746 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 ADAMTS8Q9UP79 889 aa7.34□□□□□ -1.23
CLK1-208ENST00000464454 A6NHS1 94 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 PHACTR2O75167 634 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 GDF11O95390 407 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 GHRHP01286 108 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 IGHA1P01876 353 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 SCARF2Q96GP6 870 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms