RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 RCAN3Q9UKA8 241 aa23.71■■□□□ 1.39
HMG20B-208ENST00000464304 ABCC4O15439 1325 aa23.7■■□□□ 1.38
HMG20B-208ENST00000464304 GRM8O00222 908 aa23.7■■□□□ 1.38
HMG20B-208ENST00000464304 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
HMG20B-208ENST00000464304 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
HMG20B-208ENST00000464304 PRPF40BQ6NWY9 871 aaKnown RBP23.7■■□□□ 1.38
HMG20B-208ENST00000464304 HSP90B1P14625 803 aaKnown RBP23.69■■□□□ 1.38
HMG20B-208ENST00000464304 RBM17Q96I25 401 aaKnown RBP23.69■■□□□ 1.38
HMG20B-208ENST00000464304 C9orf78Q9NZ63 289 aaPredicted RBP23.69■■□□□ 1.38
HMG20B-208ENST00000464304 KIF3CO14782 793 aa23.68■■□□□ 1.38
HMG20B-208ENST00000464304 ALDH1B1P30837 517 aa23.68■■□□□ 1.38
HMG20B-208ENST00000464304 CCT4P50991 539 aaKnown RBP23.68■■□□□ 1.38
HMG20B-208ENST00000464304 CRAMP1Q96RY5 1269 aa23.68■■□□□ 1.38
HMG20B-208ENST00000464304 ZNF219Q9P2Y4 722 aaPredicted RBP23.68■■□□□ 1.38
HMG20B-208ENST00000464304 CLUAP1Q96AJ1 413 aa23.67■■□□□ 1.38
HMG20B-208ENST00000464304 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
HMG20B-208ENST00000464304 LRRC37AA6NMS7 1700 aa23.67■■□□□ 1.38
HMG20B-208ENST00000464304 NBPF7P0C2Y1 421 aaPredicted RBP23.66■■□□□ 1.38
HMG20B-208ENST00000464304 CTSWP56202 376 aa23.66■■□□□ 1.38
HMG20B-208ENST00000464304 DDX46Q7L014 1031 aaKnown RBP23.66■■□□□ 1.38
HMG20B-208ENST00000464304 CCDC85AQ96PX6 553 aaPredicted RBP23.66■■□□□ 1.38
HMG20B-208ENST00000464304 UTYO14607 1347 aa23.65■■□□□ 1.38
HMG20B-208ENST00000464304 C21orf2O43822 256 aa23.65■■□□□ 1.38
HMG20B-208ENST00000464304 CCDC152Q4G0S7 254 aa23.64■■□□□ 1.37
HMG20B-208ENST00000464304 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
HMG20B-208ENST00000464304 TTLL11Q8NHH1 800 aa23.64■■□□□ 1.37
HMG20B-208ENST00000464304 USP44Q9H0E7 712 aa23.64■■□□□ 1.37
HMG20B-208ENST00000464304 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
HMG20B-208ENST00000464304 GRAPQ13588 217 aa23.63■■□□□ 1.37
HMG20B-208ENST00000464304 SLC51AQ86UW1 340 aa23.63■■□□□ 1.37
HMG20B-208ENST00000464304 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
HMG20B-208ENST00000464304 C7orf43Q8WVR3 580 aa23.63■■□□□ 1.37
HMG20B-208ENST00000464304 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
HMG20B-208ENST00000464304 SEC31BQ9NQW1 1179 aa23.63■■□□□ 1.37
HMG20B-208ENST00000464304 PPEF1O14829 653 aaPredicted RBP23.62■■□□□ 1.37
HMG20B-208ENST00000464304 FOXO4P98177 505 aa23.62■■□□□ 1.37
HMG20B-208ENST00000464304 EPHA10Q5JZY3 1008 aa23.62■■□□□ 1.37
HMG20B-208ENST00000464304 OLFM4Q6UX06 510 aa23.62■■□□□ 1.37
HMG20B-208ENST00000464304 ARHGAP27Q6ZUM4 889 aa23.62■■□□□ 1.37
HMG20B-208ENST00000464304 TMEM57Q8N5G2 664 aa23.62■■□□□ 1.37
HMG20B-208ENST00000464304 CELF1Q92879 486 aaKnown RBP23.62■■□□□ 1.37
HMG20B-208ENST00000464304 DZIP1LQ8IYY4 767 aaKnown RBP23.61■■□□□ 1.37
HMG20B-208ENST00000464304 KAZALD1Q96I82 304 aa23.61■■□□□ 1.37
HMG20B-208ENST00000464304 GREM2Q9H772 168 aa23.61■■□□□ 1.37
HMG20B-208ENST00000464304 RLBP1P12271 317 aa23.6■■□□□ 1.37
HMG20B-208ENST00000464304 RTL9Q8NET4 1388 aa23.6■■□□□ 1.37
HMG20B-208ENST00000464304 A0A1B0GUL6 1792 aa23.6■■□□□ 1.37
HMG20B-208ENST00000464304 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
HMG20B-208ENST00000464304 PLIN1O60240 522 aa23.59■■□□□ 1.37
HMG20B-208ENST00000464304 CSF1RP07333 972 aa23.59■■□□□ 1.37
HMG20B-208ENST00000464304 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
HMG20B-208ENST00000464304 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
HMG20B-208ENST00000464304 BBOX1O75936 387 aa23.58■■□□□ 1.37
HMG20B-208ENST00000464304 RASSF7Q02833 373 aa23.58■■□□□ 1.37
HMG20B-208ENST00000464304 CCDC93Q567U6 631 aa23.58■■□□□ 1.37
HMG20B-208ENST00000464304 SOGA3Q5TF21 947 aa23.58■■□□□ 1.37
HMG20B-208ENST00000464304 MEIS3Q99687 375 aa23.58■■□□□ 1.37
HMG20B-208ENST00000464304 LTBP1Q14766 1721 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 NFKBIEO00221 500 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 LMBR1LQ6UX01 489 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 PANK1Q8TE04 598 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 CHMP3Q9Y3E7 222 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 ATP6V0A2Q9Y487 856 aa23.57■■□□□ 1.36
HMG20B-208ENST00000464304 TIAM2Q8IVF5 1701 aa23.56■■□□□ 1.36
HMG20B-208ENST00000464304 UBTFL1P0CB47 393 aaPredicted RBP23.56■■□□□ 1.36
HMG20B-208ENST00000464304 RPS8P62241 208 aaKnown RBP23.56■■□□□ 1.36
HMG20B-208ENST00000464304 BICC1Q9H694 974 aaKnown RBP23.56■■□□□ 1.36
HMG20B-208ENST00000464304 ITGA6P23229 1130 aa23.55■■□□□ 1.36
HMG20B-208ENST00000464304 SP8Q8IXZ3 490 aa23.55■■□□□ 1.36
HMG20B-208ENST00000464304 ANKRD44Q8N8A2 993 aa23.55■■□□□ 1.36
HMG20B-208ENST00000464304 WDR90Q96KV7 1748 aa23.55■■□□□ 1.36
HMG20B-208ENST00000464304 RABL6Q3YEC7 729 aaPredicted RBP23.54■■□□□ 1.36
HMG20B-208ENST00000464304 CC2D2BQ6DHV5 1058 aa23.54■■□□□ 1.36
HMG20B-208ENST00000464304 TMC4Q7Z404 712 aa23.54■■□□□ 1.36
HMG20B-208ENST00000464304 ANKRD18AQ8IVF6 992 aa23.54■■□□□ 1.36
HMG20B-208ENST00000464304 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
HMG20B-208ENST00000464304 DNAJC5GQ8N7S2 189 aa23.54■■□□□ 1.36
HMG20B-208ENST00000464304 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
HMG20B-208ENST00000464304 DUOX1Q9NRD9 1551 aa23.53■■□□□ 1.36
HMG20B-208ENST00000464304 PRELPP51888 382 aa23.53■■□□□ 1.36
HMG20B-208ENST00000464304 TAOK3Q9H2K8 898 aa23.53■■□□□ 1.36
HMG20B-208ENST00000464304 ANKRD18BA2A2Z9 1011 aa23.52■■□□□ 1.36
HMG20B-208ENST00000464304 MS4A1P11836 297 aa23.52■■□□□ 1.36
HMG20B-208ENST00000464304 RTKN2Q8IZC4 609 aa23.52■■□□□ 1.36
HMG20B-208ENST00000464304 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.52■■□□□ 1.36
HMG20B-208ENST00000464304 LRRFIP2Q9Y608 721 aaKnown RBP23.52■■□□□ 1.36
HMG20B-208ENST00000464304 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
HMG20B-208ENST00000464304 GNAI3P08754 354 aa23.51■■□□□ 1.35
HMG20B-208ENST00000464304 HTRA3P83110 453 aa23.51■■□□□ 1.35
HMG20B-208ENST00000464304 IFIT5Q13325 482 aaKnown RBP23.51■■□□□ 1.35
HMG20B-208ENST00000464304 TMX4Q9H1E5 349 aaPredicted RBP23.51■■□□□ 1.35
HMG20B-208ENST00000464304 NMRK2Q9NPI5 230 aa23.51■■□□□ 1.35
HMG20B-208ENST00000464304 FKBP4Q02790 459 aaKnown RBP eCLIP23.5■■□□□ 1.35
HMG20B-208ENST00000464304 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
HMG20B-208ENST00000464304 IGHMBP2P38935 993 aaKnown RBP23.49■■□□□ 1.35
HMG20B-208ENST00000464304 CCDC57Q2TAC2 916 aa23.49■■□□□ 1.35
HMG20B-208ENST00000464304 ZNF594Q96JF6 807 aaPredicted RBP23.49■■□□□ 1.35
HMG20B-208ENST00000464304 GRIPAP1Q4V328 841 aa23.48■■□□□ 1.35
HMG20B-208ENST00000464304 C9orf131Q5VYM1 1079 aa23.48■■□□□ 1.35
HMG20B-208ENST00000464304 MPNDQ8N594 471 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms