RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
RAB11FIP3-208ENST00000464263 YY1P25490 414 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 PRELPP51888 382 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 GRAPQ13588 217 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 GRAPLQ8TC17 118 aaPredicted RBP19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 COL4A1P02462 1669 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 KIF16BQ96L93 1317 aa19.51■□□□□ 0.71
RAB11FIP3-208ENST00000464263 PPEF1O14829 653 aaPredicted RBP19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CTSWP56202 376 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 RASSF7Q02833 373 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CCDC152Q4G0S7 254 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 SNED1Q8TER0 1413 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 UTYO14607 1347 aa19.5■□□□□ 0.71
RAB11FIP3-208ENST00000464263 IPO8O15397 1037 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CSF1RP07333 972 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 SLC51AQ86UW1 340 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 RTKN2Q8IZC4 609 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 ATP6V0A2Q9Y487 856 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 DICER1Q9UPY3 1922 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
RAB11FIP3-208ENST00000464263 FOXO4P98177 505 aa19.48■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CCDC85AQ96PX6 553 aaPredicted RBP19.48■□□□□ 0.71
RAB11FIP3-208ENST00000464263 USP44Q9H0E7 712 aa19.48■□□□□ 0.71
RAB11FIP3-208ENST00000464263 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 LMNB1P20700 586 aa19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 RPS8P62241 208 aaKnown RBP19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 C9orf131Q5VYM1 1079 aa19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 TAOK3Q9H2K8 898 aa19.47■□□□□ 0.71
RAB11FIP3-208ENST00000464263 RTL9Q8NET4 1388 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 TRIM27P14373 513 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 GRIPAP1Q4V328 841 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 TMC4Q7Z404 712 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 GREM2Q9H772 168 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 TNNQ9UQP3 1299 aa19.46■□□□□ 0.71
RAB11FIP3-208ENST00000464263 LRRC37AA6NMS7 1700 aa19.45■□□□□ 0.7
RAB11FIP3-208ENST00000464263 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
RAB11FIP3-208ENST00000464263 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
RAB11FIP3-208ENST00000464263 RNF181Q9P0P0 153 aa19.45■□□□□ 0.7
RAB11FIP3-208ENST00000464263 ZKSCAN2Q63HK3 967 aa19.44■□□□□ 0.7
RAB11FIP3-208ENST00000464263 SUCLG2Q96I99 432 aa19.44■□□□□ 0.7
RAB11FIP3-208ENST00000464263 PSMD1Q99460 953 aa19.44■□□□□ 0.7
RAB11FIP3-208ENST00000464263 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
RAB11FIP3-208ENST00000464263 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
RAB11FIP3-208ENST00000464263 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
RAB11FIP3-208ENST00000464263 ANKRD18AQ8IVF6 992 aa19.42■□□□□ 0.7
RAB11FIP3-208ENST00000464263 RTFDC1Q9BY42 306 aaPredicted RBP19.42■□□□□ 0.7
RAB11FIP3-208ENST00000464263 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
RAB11FIP3-208ENST00000464263 ITGA6P23229 1130 aa19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 FAM161AQ3B820 660 aa19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 MPNDQ8N594 471 aa19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 CDC5LQ99459 802 aaKnown RBP19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
RAB11FIP3-208ENST00000464263 TIAM2Q8IVF5 1701 aa19.39■□□□□ 0.7
RAB11FIP3-208ENST00000464263 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 DPP8Q6V1X1 898 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 BSDC1Q9NW68 430 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
RAB11FIP3-208ENST00000464263 ANKRD18BA2A2Z9 1011 aa19.38■□□□□ 0.69
RAB11FIP3-208ENST00000464263 GPSM2P81274 684 aa19.38■□□□□ 0.69
RAB11FIP3-208ENST00000464263 IFIT5Q13325 482 aaKnown RBP19.38■□□□□ 0.69
RAB11FIP3-208ENST00000464263 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
RAB11FIP3-208ENST00000464263 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
RAB11FIP3-208ENST00000464263 DUOX1Q9NRD9 1551 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 ZC3H4Q9UPT8 1303 aaKnown RBP19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 SUPT20HQ8NEM7 779 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 MEIS3Q99687 375 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 VPS33BQ9H267 617 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 MINPP1Q9UNW1 487 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
RAB11FIP3-208ENST00000464263 UBTFL1P0CB47 393 aaPredicted RBP19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 RLBP1P12271 317 aa19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 POLLQ9UGP5 575 aa19.36■□□□□ 0.69
RAB11FIP3-208ENST00000464263 COL4A5P29400 1685 aa19.35■□□□□ 0.69
RAB11FIP3-208ENST00000464263 GNAI3P08754 354 aa19.34■□□□□ 0.69
RAB11FIP3-208ENST00000464263 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
RAB11FIP3-208ENST00000464263 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
RAB11FIP3-208ENST00000464263 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
RAB11FIP3-208ENST00000464263 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms