RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 MPNDQ8N594 471 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 ABHD8Q96I13 439 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 HHIPL1Q96JK4 782 aa22.67■■□□□ 1.22
HMGN1-210ENST00000464078 GPR101Q96P66 508 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-210ENST00000464078 HCLS1P14317 486 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-210ENST00000464078 MAP2K2P36507 400 aa22.66■■□□□ 1.22
HMGN1-210ENST00000464078 TCIRG1Q13488 830 aa22.66■■□□□ 1.22
HMGN1-210ENST00000464078 GRAPQ13588 217 aa22.66■■□□□ 1.22
HMGN1-210ENST00000464078 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
HMGN1-210ENST00000464078 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-210ENST00000464078 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
HMGN1-210ENST00000464078 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-210ENST00000464078 ZC3H15Q8WU90 426 aaKnown RBP22.66■■□□□ 1.22
HMGN1-210ENST00000464078 BEGAINQ9BUH8 593 aa22.66■■□□□ 1.22
HMGN1-210ENST00000464078 TAF1P21675 1872 aa22.65■■□□□ 1.22
HMGN1-210ENST00000464078 SAPCD2Q86UD0 394 aa22.65■■□□□ 1.22
HMGN1-210ENST00000464078 TRMT112Q9UI30 125 aaKnown RBP22.65■■□□□ 1.22
HMGN1-210ENST00000464078 TNIP1Q15025 636 aa22.64■■□□□ 1.21
HMGN1-210ENST00000464078 RALBP1Q15311 655 aa22.64■■□□□ 1.21
HMGN1-210ENST00000464078 CHL1O00533 1208 aa22.62■■□□□ 1.21
HMGN1-210ENST00000464078 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
HMGN1-210ENST00000464078 AIMP1Q12904 312 aaKnown RBP22.62■■□□□ 1.21
HMGN1-210ENST00000464078 GLIS2Q9BZE0 524 aaPredicted RBP22.62■■□□□ 1.21
HMGN1-210ENST00000464078 CA12O43570 354 aa22.61■■□□□ 1.21
HMGN1-210ENST00000464078 RAD17O75943 681 aa22.61■■□□□ 1.21
HMGN1-210ENST00000464078 HOXB7P09629 217 aa22.61■■□□□ 1.21
HMGN1-210ENST00000464078 BCL2L13Q9BXK5 485 aa22.61■■□□□ 1.21
HMGN1-210ENST00000464078 YDJCA8MPS7 323 aa22.6■■□□□ 1.21
HMGN1-210ENST00000464078 HIRAP54198 1017 aaPredicted RBP22.6■■□□□ 1.21
HMGN1-210ENST00000464078 GRM1Q13255 1194 aa22.6■■□□□ 1.21
HMGN1-210ENST00000464078 NECTIN2Q92692 538 aa22.6■■□□□ 1.21
HMGN1-210ENST00000464078 CHPF2Q9P2E5 772 aa22.6■■□□□ 1.21
HMGN1-210ENST00000464078 CDC37L1Q7L3B6 337 aa22.59■■□□□ 1.21
HMGN1-210ENST00000464078 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
HMGN1-210ENST00000464078 TRPM4Q8TD43 1214 aa22.59■■□□□ 1.21
HMGN1-210ENST00000464078 AOC2O75106 756 aa22.58■■□□□ 1.21
HMGN1-210ENST00000464078 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
HMGN1-210ENST00000464078 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
HMGN1-210ENST00000464078 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
HMGN1-210ENST00000464078 ISCA1Q9BUE6 129 aa22.58■■□□□ 1.21
HMGN1-210ENST00000464078 CNOT7Q9UIV1 285 aaKnown RBP22.58■■□□□ 1.21
HMGN1-210ENST00000464078 DPF2Q92785 391 aa22.57■■□□□ 1.2
HMGN1-210ENST00000464078 COL4A1P02462 1669 aa22.57■■□□□ 1.2
HMGN1-210ENST00000464078 H7C1D1 291 aa22.56■■□□□ 1.2
HMGN1-210ENST00000464078 HDGFL1Q5TGJ6 251 aa22.56■■□□□ 1.2
HMGN1-210ENST00000464078 MICALL2Q8IY33 904 aa22.56■■□□□ 1.2
HMGN1-210ENST00000464078 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
HMGN1-210ENST00000464078 TRIM35Q9UPQ4 493 aa22.56■■□□□ 1.2
HMGN1-210ENST00000464078 SHTN1A0MZ66 631 aa22.55■■□□□ 1.2
HMGN1-210ENST00000464078 WASHC4Q2M389 1173 aa22.55■■□□□ 1.2
HMGN1-210ENST00000464078 ANKRD13DQ6ZTN6 518 aa22.55■■□□□ 1.2
HMGN1-210ENST00000464078 MYBBP1AQ9BQG0 1328 aaKnown RBP22.55■■□□□ 1.2
HMGN1-210ENST00000464078 CELF1Q92879 486 aaKnown RBP22.54■■□□□ 1.2
HMGN1-210ENST00000464078 RPS12P25398 132 aaKnown RBP22.53■■□□□ 1.2
HMGN1-210ENST00000464078 NOGQ13253 232 aa22.53■■□□□ 1.2
HMGN1-210ENST00000464078 TRIM28Q13263 835 aaKnown RBP22.53■■□□□ 1.2
HMGN1-210ENST00000464078 CCDC146Q8IYE0 955 aa22.53■■□□□ 1.2
HMGN1-210ENST00000464078 RUNDC1Q96C34 613 aa22.53■■□□□ 1.2
HMGN1-210ENST00000464078 FAM89AQ96GI7 184 aa22.53■■□□□ 1.2
HMGN1-210ENST00000464078 TSKSQ9UJT2 592 aa22.53■■□□□ 1.2
HMGN1-210ENST00000464078 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
HMGN1-210ENST00000464078 PSMD14O00487 310 aa22.52■■□□□ 1.2
HMGN1-210ENST00000464078 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
HMGN1-210ENST00000464078 ZNF408Q9H9D4 720 aa22.52■■□□□ 1.2
HMGN1-210ENST00000464078 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
HMGN1-210ENST00000464078 RTL9Q8NET4 1388 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 ZNF609O15014 1411 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 RGS19P49795 217 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 DBNDD1Q9H9R9 158 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 POLLQ9UGP5 575 aa22.51■■□□□ 1.19
HMGN1-210ENST00000464078 ZBTB12Q9Y330 459 aaPredicted RBP22.51■■□□□ 1.19
HMGN1-210ENST00000464078 SCN9AQ15858 1988 aa22.5■■□□□ 1.19
HMGN1-210ENST00000464078 CASP8AP2Q9UKL3 1982 aa22.5■■□□□ 1.19
HMGN1-210ENST00000464078 CFAP44Q96MT7 982 aa22.5■■□□□ 1.19
HMGN1-210ENST00000464078 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 ECE2O60344 883 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 HUNKP57058 714 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 GPSM2P81274 684 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 SAMD7Q7Z3H4 446 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 ZNF428Q96B54 188 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 EYA3Q99504 573 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
HMGN1-210ENST00000464078 PSME4Q14997 1843 aa22.49■■□□□ 1.19
HMGN1-210ENST00000464078 POLR2AP24928 1970 aaKnown RBP22.49■■□□□ 1.19
HMGN1-210ENST00000464078 C6orf229H3BNL8 230 aa22.48■■□□□ 1.19
HMGN1-210ENST00000464078 IRS4O14654 1257 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-210ENST00000464078 EGFRP00533 1210 aa22.48■■□□□ 1.19
HMGN1-210ENST00000464078 KRT26Q7Z3Y9 468 aa22.48■■□□□ 1.19
HMGN1-210ENST00000464078 PODXL2Q9NZ53 605 aa22.48■■□□□ 1.19
HMGN1-210ENST00000464078 CCDC85CA6NKD9 419 aa22.47■■□□□ 1.19
HMGN1-210ENST00000464078 RPS8P62241 208 aaKnown RBP22.47■■□□□ 1.19
HMGN1-210ENST00000464078 WDR43Q15061 677 aaKnown RBP eCLIP22.47■■□□□ 1.19
HMGN1-210ENST00000464078 TBC1D10BQ4KMP7 808 aaPredicted RBP22.47■■□□□ 1.19
HMGN1-210ENST00000464078 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
HMGN1-210ENST00000464078 TBC1D16Q8TBP0 767 aa22.47■■□□□ 1.19
HMGN1-210ENST00000464078 RIMBP2O15034 1052 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms