RNA–Protein interactions for RNA: ENST00000464048.1

DENND4B-204, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-204ENST00000464048 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
DENND4B-204ENST00000464048 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
DENND4B-204ENST00000464048 GNAI2P04899 355 aa16.5■□□□□ 0.23
DENND4B-204ENST00000464048 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
DENND4B-204ENST00000464048 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
DENND4B-204ENST00000464048 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
DENND4B-204ENST00000464048 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
DENND4B-204ENST00000464048 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.23
DENND4B-204ENST00000464048 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
DENND4B-204ENST00000464048 MEIS3Q99687 375 aa16.5■□□□□ 0.23
DENND4B-204ENST00000464048 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 YY1P25490 414 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 BEND3Q5T5X7 828 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 ANKRD44Q8N8A2 993 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
DENND4B-204ENST00000464048 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
DENND4B-204ENST00000464048 MYD88Q99836 296 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 LAMB2P55268 1798 aa16.49■□□□□ 0.23
DENND4B-204ENST00000464048 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
DENND4B-204ENST00000464048 HMMRO75330 724 aa16.48■□□□□ 0.23
DENND4B-204ENST00000464048 SF3B3Q15393 1217 aaKnown RBP16.48■□□□□ 0.23
DENND4B-204ENST00000464048 C7orf43Q8WVR3 580 aa16.48■□□□□ 0.23
DENND4B-204ENST00000464048 C1orf115Q9H7X2 142 aa16.48■□□□□ 0.23
DENND4B-204ENST00000464048 CHD4Q14839 1912 aa16.48■□□□□ 0.23
DENND4B-204ENST00000464048 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
DENND4B-204ENST00000464048 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
DENND4B-204ENST00000464048 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
DENND4B-204ENST00000464048 ATP5J2-PTCD1G3V325 749 aa16.46■□□□□ 0.23
DENND4B-204ENST00000464048 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
DENND4B-204ENST00000464048 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
DENND4B-204ENST00000464048 CCDC93Q567U6 631 aa16.46■□□□□ 0.23
DENND4B-204ENST00000464048 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
DENND4B-204ENST00000464048 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 BBOX1O75936 387 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
DENND4B-204ENST00000464048 IRS4O14654 1257 aaPredicted RBP16.44■□□□□ 0.22
DENND4B-204ENST00000464048 LMNB1P20700 586 aa16.44■□□□□ 0.22
DENND4B-204ENST00000464048 PLA2G12BQ9BX93 195 aa16.44■□□□□ 0.22
DENND4B-204ENST00000464048 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
DENND4B-204ENST00000464048 H7C1W4 665 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 PDE8AO60658 829 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 GRAPQ13588 217 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 GCKRQ14397 625 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
DENND4B-204ENST00000464048 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
DENND4B-204ENST00000464048 PSMD1Q99460 953 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
DENND4B-204ENST00000464048 TAOK3Q9H2K8 898 aa16.43■□□□□ 0.22
DENND4B-204ENST00000464048 NFKBIEO00221 500 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 C21orf2O43822 256 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
DENND4B-204ENST00000464048 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 UTYO14607 1347 aa16.42■□□□□ 0.22
DENND4B-204ENST00000464048 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
DENND4B-204ENST00000464048 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
DENND4B-204ENST00000464048 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
DENND4B-204ENST00000464048 NUCB1Q02818 461 aa16.41■□□□□ 0.22
DENND4B-204ENST00000464048 CCDC152Q4G0S7 254 aa16.41■□□□□ 0.22
DENND4B-204ENST00000464048 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
DENND4B-204ENST00000464048 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
DENND4B-204ENST00000464048 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
DENND4B-204ENST00000464048 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
DENND4B-204ENST00000464048 FER1L6Q2WGJ9 1857 aa16.4■□□□□ 0.22
DENND4B-204ENST00000464048 GRM8O00222 908 aa16.4■□□□□ 0.22
DENND4B-204ENST00000464048 RGS3P49796 1198 aa16.4■□□□□ 0.22
DENND4B-204ENST00000464048 CWF19L2Q2TBE0 894 aaKnown RBP16.4■□□□□ 0.22
DENND4B-204ENST00000464048 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
DENND4B-204ENST00000464048 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
DENND4B-204ENST00000464048 CASP7P55210 303 aa16.39■□□□□ 0.21
DENND4B-204ENST00000464048 CTSWP56202 376 aa16.39■□□□□ 0.21
DENND4B-204ENST00000464048 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
DENND4B-204ENST00000464048 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
DENND4B-204ENST00000464048 MTX1Q13505 466 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
DENND4B-204ENST00000464048 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
DENND4B-204ENST00000464048 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
DENND4B-204ENST00000464048 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
DENND4B-204ENST00000464048 UBE3BQ7Z3V4 1068 aa16.37■□□□□ 0.21
DENND4B-204ENST00000464048 CDC5LQ99459 802 aaKnown RBP16.37■□□□□ 0.21
DENND4B-204ENST00000464048 RNF181Q9P0P0 153 aa16.37■□□□□ 0.21
DENND4B-204ENST00000464048 CSF1RP07333 972 aa16.36■□□□□ 0.21
DENND4B-204ENST00000464048 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
DENND4B-204ENST00000464048 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
DENND4B-204ENST00000464048 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1402.9 ms