RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 POTECB2RU33 542 aa16.6■□□□□ 0.25
XRN1-203ENST00000463916 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
XRN1-203ENST00000463916 COL4A5P29400 1685 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 CACNA1FO60840 1977 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 E9PSI1 815 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 F6X3S4 739 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
XRN1-203ENST00000463916 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
XRN1-203ENST00000463916 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.25
XRN1-203ENST00000463916 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.25
XRN1-203ENST00000463916 TOMM70O94826 608 aa16.58■□□□□ 0.24
XRN1-203ENST00000463916 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
XRN1-203ENST00000463916 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.24
XRN1-203ENST00000463916 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
XRN1-203ENST00000463916 PDE8AO60658 829 aa16.57■□□□□ 0.24
XRN1-203ENST00000463916 GCKRQ14397 625 aa16.57■□□□□ 0.24
XRN1-203ENST00000463916 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
XRN1-203ENST00000463916 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
XRN1-203ENST00000463916 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
XRN1-203ENST00000463916 H7C1W4 665 aa16.56■□□□□ 0.24
XRN1-203ENST00000463916 FZD9O00144 591 aa16.56■□□□□ 0.24
XRN1-203ENST00000463916 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
XRN1-203ENST00000463916 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
XRN1-203ENST00000463916 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
XRN1-203ENST00000463916 RTFDC1Q9BY42 306 aaPredicted RBP16.55■□□□□ 0.24
XRN1-203ENST00000463916 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
XRN1-203ENST00000463916 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
XRN1-203ENST00000463916 MPNDQ8N594 471 aa16.55■□□□□ 0.24
XRN1-203ENST00000463916 TMX4Q9H1E5 349 aaPredicted RBP16.55■□□□□ 0.24
XRN1-203ENST00000463916 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
XRN1-203ENST00000463916 CASP7P55210 303 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 AOC3Q16853 763 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 BEND3Q5T5X7 828 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
XRN1-203ENST00000463916 CTSWP56202 376 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
XRN1-203ENST00000463916 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
XRN1-203ENST00000463916 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 JDP2Q8WYK2 163 aa16.54■□□□□ 0.24
XRN1-203ENST00000463916 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
XRN1-203ENST00000463916 DUOX1Q9NRD9 1551 aa16.53■□□□□ 0.24
XRN1-203ENST00000463916 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
XRN1-203ENST00000463916 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
XRN1-203ENST00000463916 PPIP5K2O43314 1243 aa16.52■□□□□ 0.24
XRN1-203ENST00000463916 RBM46Q8TBY0 533 aaKnown RBP16.52■□□□□ 0.24
XRN1-203ENST00000463916 NSFL1CQ9UNZ2 370 aaKnown RBP16.52■□□□□ 0.24
XRN1-203ENST00000463916 GPSM2P81274 684 aa16.52■□□□□ 0.23
XRN1-203ENST00000463916 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.23
XRN1-203ENST00000463916 GREM2Q9H772 168 aa16.52■□□□□ 0.23
XRN1-203ENST00000463916 L3MBTL3Q96JM7 780 aaPredicted RBP16.51■□□□□ 0.23
XRN1-203ENST00000463916 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
XRN1-203ENST00000463916 HSPA6P17066 643 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 KIAA2012Q0VF49 1180 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 SUPT20HQ8NEM7 779 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
XRN1-203ENST00000463916 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 GPC2Q8N158 579 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 GPR101Q96P66 508 aaPredicted RBP16.49■□□□□ 0.23
XRN1-203ENST00000463916 PLA2G12BQ9BX93 195 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 LTBP1Q14766 1721 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 MYH3P11055 1940 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
XRN1-203ENST00000463916 WTIPA6NIX2 430 aaPredicted RBP16.48■□□□□ 0.23
XRN1-203ENST00000463916 EIF6P56537 245 aaKnown RBP16.48■□□□□ 0.23
XRN1-203ENST00000463916 ANKRD18AQ8IVF6 992 aa16.48■□□□□ 0.23
XRN1-203ENST00000463916 TBC1D16Q8TBP0 767 aa16.48■□□□□ 0.23
XRN1-203ENST00000463916 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 CSF1RP07333 972 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 FOXO4P98177 505 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
XRN1-203ENST00000463916 ZNRF3Q9ULT6 936 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 YDJCA8MPS7 323 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 RIMBP2O15034 1052 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 CXCL9Q07325 125 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 FSTL1Q12841 308 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
XRN1-203ENST00000463916 GRM8O00222 908 aa16.46■□□□□ 0.23
XRN1-203ENST00000463916 ALDH1L2Q3SY69 923 aa16.46■□□□□ 0.23
XRN1-203ENST00000463916 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
XRN1-203ENST00000463916 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.23
XRN1-203ENST00000463916 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
XRN1-203ENST00000463916 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.22
XRN1-203ENST00000463916 ITGA6P23229 1130 aa16.46■□□□□ 0.22
XRN1-203ENST00000463916 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.22
XRN1-203ENST00000463916 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.22
XRN1-203ENST00000463916 SCN4AP35499 1836 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 PCNTO95613 3336 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 PTPRCP08575 1304 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 RAD17O75943 681 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 SCNN1DP51172 638 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms