RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 LRRC37AA6NMS7 1700 aa26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 PPIP5K2O43314 1243 aa26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 EPHX2P34913 555 aa26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 MPNDQ8N594 471 aa26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 ZBTB38Q8NAP3 1195 aaPredicted RBP26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 CCDC191Q8NCU4 936 aa26.51■■□□□ 1.83
PDLIM4-205ENST00000463615 PASKQ96RG2 1323 aa26.5■■□□□ 1.83
PDLIM4-205ENST00000463615 HSP90B1P14625 803 aaKnown RBP26.5■■□□□ 1.83
PDLIM4-205ENST00000463615 DPP8Q6V1X1 898 aaPredicted RBP26.5■■□□□ 1.83
PDLIM4-205ENST00000463615 NIM1KQ8IY84 436 aa26.5■■□□□ 1.83
PDLIM4-205ENST00000463615 TSR2Q969E8 191 aaKnown RBP26.5■■□□□ 1.83
PDLIM4-205ENST00000463615 IRS4O14654 1257 aaPredicted RBP26.49■■□□□ 1.83
PDLIM4-205ENST00000463615 DDX58O95786 925 aaKnown RBP26.49■■□□□ 1.83
PDLIM4-205ENST00000463615 KIAA2012Q0VF49 1180 aa26.49■■□□□ 1.83
PDLIM4-205ENST00000463615 METTL22Q9BUU2 404 aaPredicted RBP26.49■■□□□ 1.83
PDLIM4-205ENST00000463615 AOC3Q16853 763 aa26.48■■□□□ 1.83
PDLIM4-205ENST00000463615 ITGBL1O95965 494 aaPredicted RBP26.47■■□□□ 1.83
PDLIM4-205ENST00000463615 PCCAP05165 728 aaPredicted RBP26.47■■□□□ 1.83
PDLIM4-205ENST00000463615 MYD88Q99836 296 aa26.47■■□□□ 1.83
PDLIM4-205ENST00000463615 CREBZFQ9NS37 354 aa26.47■■□□□ 1.83
PDLIM4-205ENST00000463615 ZNRF3Q9ULT6 936 aa26.47■■□□□ 1.83
PDLIM4-205ENST00000463615 DUOX1Q9NRD9 1551 aa26.46■■□□□ 1.83
PDLIM4-205ENST00000463615 SCNN1DP51172 638 aa26.46■■□□□ 1.83
PDLIM4-205ENST00000463615 WDR63Q8IWG1 891 aa26.46■■□□□ 1.83
PDLIM4-205ENST00000463615 CELF1Q92879 486 aaKnown RBP26.46■■□□□ 1.83
PDLIM4-205ENST00000463615 TAF1P21675 1872 aa26.46■■□□□ 1.83
PDLIM4-205ENST00000463615 LTBP1Q14766 1721 aa26.45■■□□□ 1.83
PDLIM4-205ENST00000463615 TWISTNBQ3B726 338 aaPredicted RBP26.45■■□□□ 1.82
PDLIM4-205ENST00000463615 KSR2Q6VAB6 950 aa26.45■■□□□ 1.82
PDLIM4-205ENST00000463615 ZNF428Q96B54 188 aa26.45■■□□□ 1.82
PDLIM4-205ENST00000463615 CWC25Q9NXE8 425 aaPredicted RBP26.45■■□□□ 1.82
PDLIM4-205ENST00000463615 GJA3Q9Y6H8 435 aa26.45■■□□□ 1.82
PDLIM4-205ENST00000463615 EAPPQ56P03 285 aaPredicted RBP26.44■■□□□ 1.82
PDLIM4-205ENST00000463615 STK31Q9BXU1 1019 aa26.44■■□□□ 1.82
PDLIM4-205ENST00000463615 LMOD1P29536 600 aaPredicted RBP26.43■■□□□ 1.82
PDLIM4-205ENST00000463615 CXCL9Q07325 125 aa26.42■■□□□ 1.82
PDLIM4-205ENST00000463615 RTL5Q5HYW3 569 aaPredicted RBP26.42■■□□□ 1.82
PDLIM4-205ENST00000463615 MAP3K2Q9Y2U5 619 aa26.42■■□□□ 1.82
PDLIM4-205ENST00000463615 CDHR2Q9BYE9 1310 aa26.41■■□□□ 1.82
PDLIM4-205ENST00000463615 COL4A1P02462 1669 aa26.41■■□□□ 1.82
PDLIM4-205ENST00000463615 PI4KAP2A4QPH2 592 aa26.41■■□□□ 1.82
PDLIM4-205ENST00000463615 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
PDLIM4-205ENST00000463615 PI4KAP1Q8N8J0 262 aa26.41■■□□□ 1.82
PDLIM4-205ENST00000463615 FANCIQ9NVI1 1328 aa26.4■■□□□ 1.82
PDLIM4-205ENST00000463615 PDE8AO60658 829 aa26.4■■□□□ 1.82
PDLIM4-205ENST00000463615 EPS15P42566 896 aa26.4■■□□□ 1.82
PDLIM4-205ENST00000463615 USP50Q70EL3 339 aaPredicted RBP26.4■■□□□ 1.82
PDLIM4-205ENST00000463615 IGKV5-2P06315 115 aa26.39■■□□□ 1.82
PDLIM4-205ENST00000463615 CNTROBQ8N137 903 aa26.39■■□□□ 1.82
PDLIM4-205ENST00000463615 GPRC5DQ9NZD1 345 aa26.39■■□□□ 1.82
PDLIM4-205ENST00000463615 CLEC11AQ9Y240 323 aa26.39■■□□□ 1.82
PDLIM4-205ENST00000463615 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
PDLIM4-205ENST00000463615 CIAPIN1Q6FI81 312 aa26.38■■□□□ 1.81
PDLIM4-205ENST00000463615 PODXL2Q9NZ53 605 aa26.38■■□□□ 1.81
PDLIM4-205ENST00000463615 NSFL1CQ9UNZ2 370 aaKnown RBP26.38■■□□□ 1.81
PDLIM4-205ENST00000463615 SLC4A2P04920 1241 aa26.37■■□□□ 1.81
PDLIM4-205ENST00000463615 TNIP1Q15025 636 aa26.37■■□□□ 1.81
PDLIM4-205ENST00000463615 GPSM2P81274 684 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 NEXNQ0ZGT2 675 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 WASHC4Q2M389 1173 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 MAP1SQ66K74 1059 aaPredicted RBP26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 G2E3Q7L622 706 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 SEC31BQ9NQW1 1179 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 ADARB2Q9NS39 739 aaKnown RBP26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 POLLQ9UGP5 575 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 CACNA1FO60840 1977 aa26.36■■□□□ 1.81
PDLIM4-205ENST00000463615 TMEM88BA6NKF7 163 aa26.35■■□□□ 1.81
PDLIM4-205ENST00000463615 YDJCA8MPS7 323 aa26.35■■□□□ 1.81
PDLIM4-205ENST00000463615 VAMP4O75379 141 aa26.35■■□□□ 1.81
PDLIM4-205ENST00000463615 CNTNAP1P78357 1384 aa26.34■■□□□ 1.81
PDLIM4-205ENST00000463615 NEURL1BA8MQ27 555 aa26.34■■□□□ 1.81
PDLIM4-205ENST00000463615 GMPSP49915 693 aaPredicted RBP26.34■■□□□ 1.81
PDLIM4-205ENST00000463615 IFFO2Q5TF58 517 aa26.34■■□□□ 1.81
PDLIM4-205ENST00000463615 EYA3Q99504 573 aa26.34■■□□□ 1.81
PDLIM4-205ENST00000463615 FLIIQ13045 1269 aa26.33■■□□□ 1.81
PDLIM4-205ENST00000463615 TBC1D16Q8TBP0 767 aa26.33■■□□□ 1.81
PDLIM4-205ENST00000463615 RTL9Q8NET4 1388 aa26.33■■□□□ 1.8
PDLIM4-205ENST00000463615 PGAP2Q9UHJ9 254 aa26.32■■□□□ 1.8
PDLIM4-205ENST00000463615 C6orf229H3BNL8 230 aa26.31■■□□□ 1.8
PDLIM4-205ENST00000463615 H7C1W4 665 aa26.31■■□□□ 1.8
PDLIM4-205ENST00000463615 RAD17O75943 681 aa26.31■■□□□ 1.8
PDLIM4-205ENST00000463615 CTSWP56202 376 aa26.31■■□□□ 1.8
PDLIM4-205ENST00000463615 JARID2Q92833 1246 aaPredicted RBP26.31■■□□□ 1.8
PDLIM4-205ENST00000463615 EXOSC9Q06265 439 aaKnown RBP26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 CWF19L2Q2TBE0 894 aaKnown RBP26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 TTLL11Q8NHH1 800 aa26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 DPF2Q92785 391 aa26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 SPINK5Q9NQ38 1064 aaPredicted RBP26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 PCNTO95613 3336 aa26.3■■□□□ 1.8
PDLIM4-205ENST00000463615 ZC3H15Q8WU90 426 aaKnown RBP26.29■■□□□ 1.8
PDLIM4-205ENST00000463615 PLA2G12BQ9BX93 195 aa26.29■■□□□ 1.8
PDLIM4-205ENST00000463615 MKRN1Q9UHC7 482 aaKnown RBP26.29■■□□□ 1.8
PDLIM4-205ENST00000463615 SALL2Q9Y467 1007 aaPredicted RBP26.29■■□□□ 1.8
PDLIM4-205ENST00000463615 RASSF10A6NK89 507 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 GCKRQ14397 625 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 ANKRD18AQ8IVF6 992 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 FAM9BQ8IZU0 186 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 DNAAF4Q8WXU2 420 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 CDC5LQ99459 802 aaKnown RBP26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms