RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VEGFAP15692 232 aaPredicted RBP20.74■□□□□ 0.91
COL1A1-202ENST00000463440 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
COL1A1-202ENST00000463440 PDE8AO60658 829 aa20.73■□□□□ 0.91
COL1A1-202ENST00000463440 JDP2Q8WYK2 163 aa20.73■□□□□ 0.91
COL1A1-202ENST00000463440 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
COL1A1-202ENST00000463440 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
COL1A1-202ENST00000463440 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
COL1A1-202ENST00000463440 RBM46Q8TBY0 533 aaKnown RBP20.72■□□□□ 0.91
COL1A1-202ENST00000463440 DNAAF4Q8WXU2 420 aa20.72■□□□□ 0.91
COL1A1-202ENST00000463440 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
COL1A1-202ENST00000463440 DDNO94850 711 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-202ENST00000463440 CWF19L2Q2TBE0 894 aaKnown RBP20.71■□□□□ 0.91
COL1A1-202ENST00000463440 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
COL1A1-202ENST00000463440 DPP8Q6V1X1 898 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-202ENST00000463440 MPNDQ8N594 471 aa20.71■□□□□ 0.91
COL1A1-202ENST00000463440 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-202ENST00000463440 VPS33BQ9H267 617 aa20.71■□□□□ 0.91
COL1A1-202ENST00000463440 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
COL1A1-202ENST00000463440 LARGE2Q8N3Y3 721 aa20.7■□□□□ 0.9
COL1A1-202ENST00000463440 CELF1Q92879 486 aaKnown RBP20.7■□□□□ 0.9
COL1A1-202ENST00000463440 TAF1P21675 1872 aa20.69■□□□□ 0.9
COL1A1-202ENST00000463440 FZD9O00144 591 aa20.69■□□□□ 0.9
COL1A1-202ENST00000463440 SLFN5Q08AF3 891 aa20.69■□□□□ 0.9
COL1A1-202ENST00000463440 LINS1Q8NG48 757 aa20.69■□□□□ 0.9
COL1A1-202ENST00000463440 RTFDC1Q9BY42 306 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-202ENST00000463440 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
COL1A1-202ENST00000463440 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
COL1A1-202ENST00000463440 RPS8P62241 208 aaKnown RBP20.68■□□□□ 0.9
COL1A1-202ENST00000463440 GCKRQ14397 625 aa20.68■□□□□ 0.9
COL1A1-202ENST00000463440 ZNF541Q9H0D2 1346 aa20.68■□□□□ 0.9
COL1A1-202ENST00000463440 POTECB2RU33 542 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 H7C1W4 665 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 HSPA6P17066 643 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 FSTL1Q12841 308 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 NIM1KQ8IY84 436 aa20.67■□□□□ 0.9
COL1A1-202ENST00000463440 IQCA1LA6NCM1 817 aa20.66■□□□□ 0.9
COL1A1-202ENST00000463440 CTSWP56202 376 aa20.66■□□□□ 0.9
COL1A1-202ENST00000463440 AOC3Q16853 763 aa20.66■□□□□ 0.9
COL1A1-202ENST00000463440 MIER1Q8N108 512 aa20.66■□□□□ 0.9
COL1A1-202ENST00000463440 L3MBTL3Q96JM7 780 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-202ENST00000463440 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
COL1A1-202ENST00000463440 LRRC37AA6NMS7 1700 aa20.65■□□□□ 0.9
COL1A1-202ENST00000463440 F6X3S4 739 aa20.65■□□□□ 0.9
COL1A1-202ENST00000463440 SMC1BQ8NDV3 1235 aa20.65■□□□□ 0.9
COL1A1-202ENST00000463440 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
COL1A1-202ENST00000463440 CCDC85AQ96PX6 553 aaPredicted RBP20.65■□□□□ 0.9
COL1A1-202ENST00000463440 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
COL1A1-202ENST00000463440 GPC2Q8N158 579 aa20.64■□□□□ 0.89
COL1A1-202ENST00000463440 COL4A5P29400 1685 aa20.64■□□□□ 0.89
COL1A1-202ENST00000463440 KIAA2012Q0VF49 1180 aa20.63■□□□□ 0.89
COL1A1-202ENST00000463440 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
COL1A1-202ENST00000463440 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
COL1A1-202ENST00000463440 TTLL11Q8NHH1 800 aa20.63■□□□□ 0.89
COL1A1-202ENST00000463440 CDC5LQ99459 802 aaKnown RBP20.63■□□□□ 0.89
COL1A1-202ENST00000463440 GPSM2P81274 684 aa20.62■□□□□ 0.89
COL1A1-202ENST00000463440 PLA2G12BQ9BX93 195 aa20.62■□□□□ 0.89
COL1A1-202ENST00000463440 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
COL1A1-202ENST00000463440 GJA3Q9Y6H8 435 aa20.62■□□□□ 0.89
COL1A1-202ENST00000463440 MYH3P11055 1940 aa20.62■□□□□ 0.89
COL1A1-202ENST00000463440 COL4A1P02462 1669 aa20.61■□□□□ 0.89
COL1A1-202ENST00000463440 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
COL1A1-202ENST00000463440 CASP7P55210 303 aa20.61■□□□□ 0.89
COL1A1-202ENST00000463440 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
COL1A1-202ENST00000463440 MRPL50Q8N5N7 158 aaKnown RBP20.61■□□□□ 0.89
COL1A1-202ENST00000463440 HACL1Q9UJ83 578 aa20.61■□□□□ 0.89
COL1A1-202ENST00000463440 SCN4AP35499 1836 aa20.61■□□□□ 0.89
COL1A1-202ENST00000463440 RTL9Q8NET4 1388 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 APLP1P51693 650 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 WASHC4Q2M389 1173 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 EYA3Q99504 573 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 TAF1DQ9H5J8 278 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-202ENST00000463440 GREM2Q9H772 168 aa20.6■□□□□ 0.89
COL1A1-202ENST00000463440 DUOX1Q9NRD9 1551 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 CT47B1P0C2W7 299 aaPredicted RBP20.59■□□□□ 0.89
COL1A1-202ENST00000463440 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 PODXL2Q9NZ53 605 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
COL1A1-202ENST00000463440 PTPRCP08575 1304 aa20.58■□□□□ 0.89
COL1A1-202ENST00000463440 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.89
COL1A1-202ENST00000463440 POLLQ9UGP5 575 aa20.58■□□□□ 0.89
COL1A1-202ENST00000463440 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-202ENST00000463440 EPHX2P34913 555 aa20.57■□□□□ 0.88
COL1A1-202ENST00000463440 TBC1D16Q8TBP0 767 aa20.57■□□□□ 0.88
COL1A1-202ENST00000463440 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-202ENST00000463440 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-202ENST00000463440 GGA1Q9UJY5 639 aa20.57■□□□□ 0.88
COL1A1-202ENST00000463440 GRM8O00222 908 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 UFL1O94874 794 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 CSF1RP07333 972 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 IGHMBP2P38935 993 aaKnown RBP20.56■□□□□ 0.88
COL1A1-202ENST00000463440 CXCL9Q07325 125 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 TNIP1Q15025 636 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 CHADLQ6NUI6 762 aa20.56■□□□□ 0.88
COL1A1-202ENST00000463440 PNMA8AQ86V59 439 aaPredicted RBP20.56■□□□□ 0.88
COL1A1-202ENST00000463440 LDHDQ86WU2 507 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms