RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 PSMD1Q99460 953 aa16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 MYH3P11055 1940 aa16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 H7C1W4 665 aa16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 GCKRQ14397 625 aa16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
R3HDM1-213ENST00000463230 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 BRPF1P55201 1214 aaPredicted RBP16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 LRRC37AA6NMS7 1700 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 SP8Q8IXZ3 490 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 PLA2G12BQ9BX93 195 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 VPS33BQ9H267 617 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
R3HDM1-213ENST00000463230 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
R3HDM1-213ENST00000463230 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
R3HDM1-213ENST00000463230 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
R3HDM1-213ENST00000463230 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
R3HDM1-213ENST00000463230 KDM2BQ8NHM5 1336 aa16.59■□□□□ 0.25
R3HDM1-213ENST00000463230 PRELPP51888 382 aa16.59■□□□□ 0.25
R3HDM1-213ENST00000463230 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
R3HDM1-213ENST00000463230 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
R3HDM1-213ENST00000463230 CTSWP56202 376 aa16.58■□□□□ 0.24
R3HDM1-213ENST00000463230 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
R3HDM1-213ENST00000463230 CASP7P55210 303 aa16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 SMC4Q9NTJ3 1288 aa16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 F6X3S4 739 aa16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
R3HDM1-213ENST00000463230 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
R3HDM1-213ENST00000463230 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 TAF1P21675 1872 aa16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
R3HDM1-213ENST00000463230 GRM8O00222 908 aa16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 MPNDQ8N594 471 aa16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 WDR90Q96KV7 1748 aa16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 CELF1Q92879 486 aaKnown RBP16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
R3HDM1-213ENST00000463230 CSF1RP07333 972 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 ARHGAP45Q92619 1136 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 UTYO14607 1347 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
R3HDM1-213ENST00000463230 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
R3HDM1-213ENST00000463230 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
R3HDM1-213ENST00000463230 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 GOLGB1Q14789 3259 aaKnown RBP16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 FZD9O00144 591 aa16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
R3HDM1-213ENST00000463230 KIF3CO14782 793 aa16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 LARGE2Q8N3Y3 721 aa16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 GREM2Q9H772 168 aa16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 COL4A1P02462 1669 aa16.5■□□□□ 0.23
R3HDM1-213ENST00000463230 FOXO4P98177 505 aa16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 EYA3Q99504 573 aa16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 PPIP5K2O43314 1243 aa16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
R3HDM1-213ENST00000463230 SCN4AP35499 1836 aa16.48■□□□□ 0.23
R3HDM1-213ENST00000463230 IGHMBP2P38935 993 aaKnown RBP16.48■□□□□ 0.23
R3HDM1-213ENST00000463230 NMRK2Q9NPI5 230 aa16.48■□□□□ 0.23
R3HDM1-213ENST00000463230 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
R3HDM1-213ENST00000463230 VEGFAP15692 232 aaPredicted RBP16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 GPSM2P81274 684 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 XDHP47989 1333 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 SPEF2Q9C093 1822 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 ITGA6P23229 1130 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 COL4A5P29400 1685 aa16.47■□□□□ 0.23
R3HDM1-213ENST00000463230 UTRNP46939 3433 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 GPC2Q8N158 579 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms