RNA–Protein interactions for RNA: ENST00000463143.5

DUBR-201, DPPA2 upstream binding RNA, humanhuman

TSL 3

Gene DUBR, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-201ENST00000463143 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
DUBR-201ENST00000463143 TTLL11Q8NHH1 800 aa11.33□□□□□ -0.6
DUBR-201ENST00000463143 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
DUBR-201ENST00000463143 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
DUBR-201ENST00000463143 PA2G4Q9UQ80 394 aaKnown RBP11.33□□□□□ -0.6
DUBR-201ENST00000463143 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
DUBR-201ENST00000463143 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.6
DUBR-201ENST00000463143 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 SMARCA5O60264 1052 aaPredicted RBP11.32□□□□□ -0.6
DUBR-201ENST00000463143 TM4SF1P30408 202 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 SKAP1Q86WV1 359 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 SIL1Q9H173 461 aa11.32□□□□□ -0.6
DUBR-201ENST00000463143 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
DUBR-201ENST00000463143 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
DUBR-201ENST00000463143 SERPINB2P05120 415 aa11.31□□□□□ -0.6
DUBR-201ENST00000463143 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
DUBR-201ENST00000463143 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
DUBR-201ENST00000463143 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
DUBR-201ENST00000463143 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
DUBR-201ENST00000463143 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
DUBR-201ENST00000463143 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
DUBR-201ENST00000463143 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
DUBR-201ENST00000463143 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
DUBR-201ENST00000463143 ITGA6P23229 1130 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 PDE4AP27815 886 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 ST5P78524 1137 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
DUBR-201ENST00000463143 GREM2Q9H772 168 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
DUBR-201ENST00000463143 IL15P40933 162 aaPredicted RBP11.29□□□□□ -0.6
DUBR-201ENST00000463143 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
DUBR-201ENST00000463143 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
DUBR-201ENST00000463143 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
DUBR-201ENST00000463143 IL1RAPL2Q9NP60 686 aa11.29□□□□□ -0.6
DUBR-201ENST00000463143 TAF1LQ8IZX4 1826 aa11.29□□□□□ -0.6
DUBR-201ENST00000463143 EYA2O00167 538 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
DUBR-201ENST00000463143 CIAO1O76071 339 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 SASH1O94885 1247 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 MMP10P09238 476 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 DDR1Q08345 913 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 MSL1Q68DK7 614 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
DUBR-201ENST00000463143 RGPD3A6NKT7 1758 aaPredicted RBP11.27□□□□□ -0.61
DUBR-201ENST00000463143 RGPD4Q7Z3J3 1758 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
DUBR-201ENST00000463143 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
DUBR-201ENST00000463143 TFCP2Q12800 502 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 SLC16A10Q8TF71 515 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
DUBR-201ENST00000463143 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 SEC31BQ9NQW1 1179 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 NUP98P52948 1817 aa11.27□□□□□ -0.61
DUBR-201ENST00000463143 AFDNP55196 1824 aaKnown RBP11.27□□□□□ -0.61
DUBR-201ENST00000463143 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
DUBR-201ENST00000463143 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
DUBR-201ENST00000463143 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
DUBR-201ENST00000463143 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
DUBR-201ENST00000463143 PLEKHM2Q8IWE5 1019 aa11.26□□□□□ -0.61
DUBR-201ENST00000463143 PUS3Q9BZE2 481 aaKnown RBP11.26□□□□□ -0.61
DUBR-201ENST00000463143 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 AACSQ86V21 672 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 OTUD7AQ8TE49 926 aaPredicted RBP11.25□□□□□ -0.61
DUBR-201ENST00000463143 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
DUBR-201ENST00000463143 GPATCH3Q96I76 525 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 BRIP1Q9BX63 1249 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
DUBR-201ENST00000463143 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
DUBR-201ENST00000463143 BCORQ6W2J9 1755 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 MX1P20591 662 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 PDE6BP35913 854 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 RPS8P62241 208 aaKnown RBP11.24□□□□□ -0.61
DUBR-201ENST00000463143 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
DUBR-201ENST00000463143 RBM17Q96I25 401 aaKnown RBP11.24□□□□□ -0.61
DUBR-201ENST00000463143 NEUROD6Q96NK8 337 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
DUBR-201ENST00000463143 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
DUBR-201ENST00000463143 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 AKAP2Q9Y2D5 859 aa11.24□□□□□ -0.61
DUBR-201ENST00000463143 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
DUBR-201ENST00000463143 PDE1AP54750 535 aa11.23□□□□□ -0.61
DUBR-201ENST00000463143 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
DUBR-201ENST00000463143 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
DUBR-201ENST00000463143 EAF2Q96CJ1 260 aaPredicted RBP11.23□□□□□ -0.61
DUBR-201ENST00000463143 STAP2Q9UGK3 403 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms