RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
SSBP1-203ENST00000463093 UTYO14607 1347 aa17.21■□□□□ 0.34
SSBP1-203ENST00000463093 NFKBIEO00221 500 aa17.2■□□□□ 0.34
SSBP1-203ENST00000463093 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-203ENST00000463093 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
SSBP1-203ENST00000463093 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
SSBP1-203ENST00000463093 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
SSBP1-203ENST00000463093 FRAT1Q92837 279 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-203ENST00000463093 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
SSBP1-203ENST00000463093 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
SSBP1-203ENST00000463093 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SSBP1-203ENST00000463093 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
SSBP1-203ENST00000463093 TRIM27P14373 513 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 YY1P25490 414 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 FOXO4P98177 505 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 CCDC85AQ96PX6 553 aaPredicted RBP17.19■□□□□ 0.34
SSBP1-203ENST00000463093 DLEC1Q9Y238 1755 aa17.19■□□□□ 0.34
SSBP1-203ENST00000463093 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
SSBP1-203ENST00000463093 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-203ENST00000463093 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
SSBP1-203ENST00000463093 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
SSBP1-203ENST00000463093 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-203ENST00000463093 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
SSBP1-203ENST00000463093 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
SSBP1-203ENST00000463093 LMNB1P20700 586 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 PRELPP51888 382 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 RASSF7Q02833 373 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 GREM2Q9H772 168 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
SSBP1-203ENST00000463093 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSBP1-203ENST00000463093 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
SSBP1-203ENST00000463093 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
SSBP1-203ENST00000463093 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SSBP1-203ENST00000463093 PSMD1Q99460 953 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 CHD4Q14839 1912 aa17.15■□□□□ 0.34
SSBP1-203ENST00000463093 MPNDQ8N594 471 aa17.14■□□□□ 0.33
SSBP1-203ENST00000463093 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
SSBP1-203ENST00000463093 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
SSBP1-203ENST00000463093 ITGA6P23229 1130 aa17.13■□□□□ 0.33
SSBP1-203ENST00000463093 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
SSBP1-203ENST00000463093 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-203ENST00000463093 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-203ENST00000463093 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-203ENST00000463093 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
SSBP1-203ENST00000463093 ANKRD18BA2A2Z9 1011 aa17.12■□□□□ 0.33
SSBP1-203ENST00000463093 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
SSBP1-203ENST00000463093 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-203ENST00000463093 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-203ENST00000463093 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
SSBP1-203ENST00000463093 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
SSBP1-203ENST00000463093 LAMB2P55268 1798 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
SSBP1-203ENST00000463093 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SSBP1-203ENST00000463093 GPSM2P81274 684 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 CCDC57Q2TAC2 916 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SSBP1-203ENST00000463093 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
SSBP1-203ENST00000463093 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
SSBP1-203ENST00000463093 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
SSBP1-203ENST00000463093 TAF1P21675 1872 aa17.1■□□□□ 0.33
SSBP1-203ENST00000463093 RLBP1P12271 317 aa17.1■□□□□ 0.33
SSBP1-203ENST00000463093 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
SSBP1-203ENST00000463093 MEIS3Q99687 375 aa17.1■□□□□ 0.33
SSBP1-203ENST00000463093 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
SSBP1-203ENST00000463093 UTRNP46939 3433 aa17.1■□□□□ 0.33
SSBP1-203ENST00000463093 GNAI3P08754 354 aa17.09■□□□□ 0.33
SSBP1-203ENST00000463093 MS4A1P11836 297 aa17.09■□□□□ 0.33
SSBP1-203ENST00000463093 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SSBP1-203ENST00000463093 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
SSBP1-203ENST00000463093 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
SSBP1-203ENST00000463093 FER1L6Q2WGJ9 1857 aa17.09■□□□□ 0.33
SSBP1-203ENST00000463093 SBF1O95248 1867 aa17.08■□□□□ 0.33
SSBP1-203ENST00000463093 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-203ENST00000463093 POLLQ9UGP5 575 aa17.08■□□□□ 0.32
SSBP1-203ENST00000463093 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SSBP1-203ENST00000463093 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
SSBP1-203ENST00000463093 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
SSBP1-203ENST00000463093 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-203ENST00000463093 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
SSBP1-203ENST00000463093 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
SSBP1-203ENST00000463093 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
SSBP1-203ENST00000463093 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms