RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 FMNL2Q96PY5 1086 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
GARNL3-212ENST00000463005 SIPA1L3O60292 1781 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-212ENST00000463005 CAMTA2O94983 1202 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 NPR1P16066 1061 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-212ENST00000463005 RTKN2Q8IZC4 609 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 IL17REQ8NFR9 667 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 C7orf43Q8WVR3 580 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
GARNL3-212ENST00000463005 HACL1Q9UJ83 578 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-212ENST00000463005 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
GARNL3-212ENST00000463005 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-212ENST00000463005 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 TRIM66O15016 1216 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 A1BGP04217 495 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 ALDH1B1P30837 517 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 LBX1P52954 281 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 FKBP4Q02790 459 aaKnown RBP eCLIP10.69□□□□□ -0.7
GARNL3-212ENST00000463005 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
GARNL3-212ENST00000463005 ZNF652Q9Y2D9 606 aa10.69□□□□□ -0.7
GARNL3-212ENST00000463005 BCORQ6W2J9 1755 aa10.68□□□□□ -0.7
GARNL3-212ENST00000463005 SLC34A2O95436 690 aa10.68□□□□□ -0.7
GARNL3-212ENST00000463005 EPHX2P34913 555 aa10.68□□□□□ -0.7
GARNL3-212ENST00000463005 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-212ENST00000463005 NBPF5PQ86XG9 351 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-212ENST00000463005 CNTROBQ8N137 903 aa10.68□□□□□ -0.7
GARNL3-212ENST00000463005 FZD9O00144 591 aa10.67□□□□□ -0.7
GARNL3-212ENST00000463005 ADAMTSL1Q8N6G6 1762 aa10.67□□□□□ -0.7
GARNL3-212ENST00000463005 WDR33Q9C0J8 1336 aaKnown RBP10.66□□□□□ -0.7
GARNL3-212ENST00000463005 BTBD11A6QL63 1104 aa10.66□□□□□ -0.7
GARNL3-212ENST00000463005 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
GARNL3-212ENST00000463005 GPC2Q8N158 579 aa10.66□□□□□ -0.7
GARNL3-212ENST00000463005 ABHD8Q96I13 439 aa10.66□□□□□ -0.7
GARNL3-212ENST00000463005 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
GARNL3-212ENST00000463005 TRPM7Q96QT4 1865 aa10.66□□□□□ -0.7
GARNL3-212ENST00000463005 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-212ENST00000463005 IARSP41252 1262 aaKnown RBP10.65□□□□□ -0.7
GARNL3-212ENST00000463005 ECE1P42892 770 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 CC2D2BQ6DHV5 1058 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 JDP2Q8WYK2 163 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 BEGAINQ9BUH8 593 aa10.65□□□□□ -0.7
GARNL3-212ENST00000463005 ZNF277Q9NRM2 450 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-212ENST00000463005 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.71
GARNL3-212ENST00000463005 ZNF541Q9H0D2 1346 aa10.64□□□□□ -0.71
GARNL3-212ENST00000463005 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 EIF6P56537 245 aaKnown RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 PDE4DQ08499 809 aa10.64□□□□□ -0.71
GARNL3-212ENST00000463005 TSR1Q2NL82 804 aaKnown RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 MAP1SQ66K74 1059 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 PSMD1Q99460 953 aa10.64□□□□□ -0.71
GARNL3-212ENST00000463005 DDX21Q9NR30 783 aaKnown RBP eCLIP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 ABT1Q9ULW3 272 aaKnown RBP10.64□□□□□ -0.71
GARNL3-212ENST00000463005 PCDHGA10Q9Y5H3 936 aa10.64□□□□□ -0.71
GARNL3-212ENST00000463005 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
GARNL3-212ENST00000463005 KCNQ3O43525 872 aa10.63□□□□□ -0.71
GARNL3-212ENST00000463005 GTF2E1P29083 439 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-212ENST00000463005 LMOD1P29536 600 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-212ENST00000463005 RGS19P49795 217 aa10.63□□□□□ -0.71
GARNL3-212ENST00000463005 NIP7Q9Y221 180 aaKnown RBP eCLIP10.63□□□□□ -0.71
GARNL3-212ENST00000463005 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-212ENST00000463005 MLLT1Q03111 559 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-212ENST00000463005 PTGDRQ13258 359 aa10.62□□□□□ -0.71
GARNL3-212ENST00000463005 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
GARNL3-212ENST00000463005 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
GARNL3-212ENST00000463005 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
GARNL3-212ENST00000463005 NUP98P52948 1817 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 MAP3K7O43318 606 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 NUDT7P0C024 238 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-212ENST00000463005 MAP2K2P36507 400 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 ARSIQ5FYB1 569 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 USP50Q70EL3 339 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-212ENST00000463005 SLAIN1Q8ND83 568 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
GARNL3-212ENST00000463005 CAPNS2Q96L46 248 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 GPR101Q96P66 508 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-212ENST00000463005 NYXQ9GZU5 481 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 NPC1L1Q9UHC9 1359 aa10.61□□□□□ -0.71
GARNL3-212ENST00000463005 CCDC85CA6NKD9 419 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 IRF6O14896 467 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
GARNL3-212ENST00000463005 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-212ENST00000463005 CRY2Q49AN0 593 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 OLFM4Q6UX06 510 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 PHACTR3Q96KR7 559 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 VPS33BQ9H267 617 aa10.6□□□□□ -0.71
GARNL3-212ENST00000463005 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-212ENST00000463005 GJA3Q9Y6H8 435 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms