RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 GCKRQ14397 625 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 BEND3Q5T5X7 828 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
TRAPPC12-214ENST00000462983 H7C1W4 665 aa11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 IPO8O15397 1037 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 PDE8AO60658 829 aa11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 TRIM27P14373 513 aa11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 TAOK3Q9H2K8 898 aa11.59□□□□□ -0.55
TRAPPC12-214ENST00000462983 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 LMNB1P20700 586 aa11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 GRAPQ13588 217 aa11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 GRAPLQ8TC17 118 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
TRAPPC12-214ENST00000462983 PLIN1O60240 522 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 RLBP1P12271 317 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 CTSWP56202 376 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 PDE3AQ14432 1141 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 RTKN2Q8IZC4 609 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 API5Q9BZZ5 524 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 ZNF277Q9NRM2 450 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 LTBP3Q9NS15 1303 aa11.57□□□□□ -0.56
TRAPPC12-214ENST00000462983 ALDH1L1O75891 902 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 BBOX1O75936 387 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 CASP7P55210 303 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 CCDC152Q4G0S7 254 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 ATP6V0A2Q9Y487 856 aa11.56□□□□□ -0.56
TRAPPC12-214ENST00000462983 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 GRM8O00222 908 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 RPS8P62241 208 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 INTS3Q68E01 1043 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 GREM2Q9H772 168 aa11.55□□□□□ -0.56
TRAPPC12-214ENST00000462983 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-214ENST00000462983 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
TRAPPC12-214ENST00000462983 GPBP1L1Q9HC44 474 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-214ENST00000462983 LTBP1Q14766 1721 aa11.54□□□□□ -0.56
TRAPPC12-214ENST00000462983 A0A1B0GUL6 1792 aa11.54□□□□□ -0.56
TRAPPC12-214ENST00000462983 NBPF7P0C2Y1 421 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 IARSP41252 1262 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 EPHA10Q5JZY3 1008 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 DPP8Q6V1X1 898 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 MPNDQ8N594 471 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 PSMD1Q99460 953 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 DUOX1Q9NRD9 1551 aa11.53□□□□□ -0.56
TRAPPC12-214ENST00000462983 COL4A5P29400 1685 aa11.52□□□□□ -0.56
TRAPPC12-214ENST00000462983 MS4A1P11836 297 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 ITGA6P23229 1130 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 FOXO4P98177 505 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 SUCLG2Q96I99 432 aa11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-214ENST00000462983 CSF1RP07333 972 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 GPSM2P81274 684 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 MVPQ14764 893 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 AOC3Q16853 763 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 HDAC5Q9UQL6 1122 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 RTL9Q8NET4 1388 aa11.51□□□□□ -0.57
TRAPPC12-214ENST00000462983 PPIP5K2O43314 1243 aa11.5□□□□□ -0.57
TRAPPC12-214ENST00000462983 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-214ENST00000462983 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
TRAPPC12-214ENST00000462983 JDP2Q8WYK2 163 aa11.5□□□□□ -0.57
TRAPPC12-214ENST00000462983 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
TRAPPC12-214ENST00000462983 RTFDC1Q9BY42 306 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms