RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
HDAC6-213ENST00000462730 RABEP1Q15276 862 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
HDAC6-213ENST00000462730 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 GNPATO15228 680 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 TNNI3KQ59H18 835 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 ANO2Q9NQ90 1003 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 FPGT-TNNI3KV9GXZ4 949 aa17.6■□□□□ 0.41
HDAC6-213ENST00000462730 FRAT2O75474 233 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-213ENST00000462730 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
HDAC6-213ENST00000462730 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
HDAC6-213ENST00000462730 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
HDAC6-213ENST00000462730 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-213ENST00000462730 TRIM37O94972 964 aa17.59■□□□□ 0.41
HDAC6-213ENST00000462730 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
HDAC6-213ENST00000462730 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
HDAC6-213ENST00000462730 LAMB2P55268 1798 aa17.58■□□□□ 0.41
HDAC6-213ENST00000462730 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
HDAC6-213ENST00000462730 CD2BP2O95400 341 aaKnown RBP17.58■□□□□ 0.4
HDAC6-213ENST00000462730 PARP10Q53GL7 1025 aa17.58■□□□□ 0.4
HDAC6-213ENST00000462730 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-213ENST00000462730 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.4
HDAC6-213ENST00000462730 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
HDAC6-213ENST00000462730 CSF1RP07333 972 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 MCCP23508 829 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 CTSWP56202 376 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 ATG9AQ7Z3C6 839 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 EVI5LQ96CN4 794 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-213ENST00000462730 IL25Q9H293 177 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 RTN4Q9NQC3 1192 aaKnown RBP17.57■□□□□ 0.4
HDAC6-213ENST00000462730 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 FAM177BA6PVY3 158 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 CLEC4GQ6UXB4 293 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 AMIGO3Q86WK7 504 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
HDAC6-213ENST00000462730 DBNLQ9UJU6 430 aaKnown RBP17.57■□□□□ 0.4
HDAC6-213ENST00000462730 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
HDAC6-213ENST00000462730 SGSM2O43147 1006 aa17.56■□□□□ 0.4
HDAC6-213ENST00000462730 IL15P40933 162 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-213ENST00000462730 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
HDAC6-213ENST00000462730 BOLA2Q9H3K6 86 aa17.56■□□□□ 0.4
HDAC6-213ENST00000462730 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-213ENST00000462730 EYA2O00167 538 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 PDE8AO60658 829 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 NTSR2O95665 410 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 BRPF3Q9ULD4 1205 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 RXRBP28702 533 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
HDAC6-213ENST00000462730 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
HDAC6-213ENST00000462730 GREM2Q9H772 168 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 NARFQ9UHQ1 456 aa17.55■□□□□ 0.4
HDAC6-213ENST00000462730 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
HDAC6-213ENST00000462730 CIAO1O76071 339 aa17.54■□□□□ 0.4
HDAC6-213ENST00000462730 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
HDAC6-213ENST00000462730 AK7Q96M32 723 aa17.54■□□□□ 0.4
HDAC6-213ENST00000462730 DBNDD2Q9BQY9 259 aa17.54■□□□□ 0.4
HDAC6-213ENST00000462730 RGL2O15211 777 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 ITGA6P23229 1130 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 PUS3Q9BZE2 481 aaKnown RBP17.53■□□□□ 0.4
HDAC6-213ENST00000462730 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 SRP68Q9UHB9 627 aaKnown RBP17.53■□□□□ 0.4
HDAC6-213ENST00000462730 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 LRP5O75197 1615 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 EPB41L2O43491 1005 aaKnown RBP17.53■□□□□ 0.4
HDAC6-213ENST00000462730 HCLS1P14317 486 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-213ENST00000462730 ATP5JP18859 108 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
HDAC6-213ENST00000462730 ZNF609O15014 1411 aa17.52■□□□□ 0.4
HDAC6-213ENST00000462730 ZPR1O75312 459 aa17.52■□□□□ 0.4
HDAC6-213ENST00000462730 PHF14O94880 888 aa17.52■□□□□ 0.4
HDAC6-213ENST00000462730 SLC27A3Q5K4L6 730 aa17.52■□□□□ 0.4
HDAC6-213ENST00000462730 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-213ENST00000462730 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
HDAC6-213ENST00000462730 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 HIP1O00291 1037 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
HDAC6-213ENST00000462730 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
HDAC6-213ENST00000462730 RAD50Q92878 1312 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 ST18O60284 1047 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 ANAPC15P60006 121 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
HDAC6-213ENST00000462730 RIC1Q4ADV7 1423 aa17.5■□□□□ 0.39
HDAC6-213ENST00000462730 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
HDAC6-213ENST00000462730 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
HDAC6-213ENST00000462730 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-213ENST00000462730 TRAPPC3LQ5T215 181 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms