RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 BAG6P46379 1132 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
PDCD4-204ENST00000462577 PLEKHO1Q53GL0 409 aaPredicted RBP6.92□□□□□ -1.3
PDCD4-204ENST00000462577 RSPH6AQ9H0K4 717 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 KIF13BQ9NQT8 1826 aa6.92□□□□□ -1.3
PDCD4-204ENST00000462577 SCN7AQ01118 1682 aa6.91□□□□□ -1.3
PDCD4-204ENST00000462577 GFRA3O60609 400 aa6.91□□□□□ -1.3
PDCD4-204ENST00000462577 AKAP4Q5JQC9 854 aa6.91□□□□□ -1.3
PDCD4-204ENST00000462577 SPRYD7Q5W111 196 aa6.91□□□□□ -1.3
PDCD4-204ENST00000462577 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
PDCD4-204ENST00000462577 MAP3K5Q99683 1374 aa6.91□□□□□ -1.3
PDCD4-204ENST00000462577 NUP98P52948 1817 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
PDCD4-204ENST00000462577 HMOX1P09601 288 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 MMP16P51512 607 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 CNGB1Q14028 1251 aaPredicted RBP6.9□□□□□ -1.3
PDCD4-204ENST00000462577 ZNF530Q6P9A1 599 aaPredicted RBP6.9□□□□□ -1.3
PDCD4-204ENST00000462577 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
PDCD4-204ENST00000462577 DCAF5Q96JK2 942 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 CAMKK2Q96RR4 588 aa6.9□□□□□ -1.3
PDCD4-204ENST00000462577 GPBP1L1Q9HC44 474 aaPredicted RBP6.9□□□□□ -1.3
PDCD4-204ENST00000462577 CEMIPQ8WUJ3 1361 aa6.9□□□□□ -1.31
PDCD4-204ENST00000462577 KCNQ2O43526 872 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 APBA3O96018 575 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 U2AF1L5P0DN76 240 aaPredicted RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 U2AF1Q01081 240 aaKnown RBP eCLIP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 DIXDC1Q155Q3 683 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 MTHFSDQ2M296 383 aaKnown RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 PTF1AQ7RTS3 328 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 PLEKHF1Q96S99 279 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 PNNQ9H307 717 aaKnown RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 PCDHB15Q9Y5E8 787 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 DLEC1Q9Y238 1755 aa6.89□□□□□ -1.31
PDCD4-204ENST00000462577 AFDNP55196 1824 aaKnown RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 BRCA1P38398 1863 aaKnown RBP6.89□□□□□ -1.31
PDCD4-204ENST00000462577 N4BP2Q86UW6 1770 aaPredicted RBP6.88□□□□□ -1.31
PDCD4-204ENST00000462577 ANP32CO43423 234 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 HTATSF1O43719 755 aaKnown RBP6.88□□□□□ -1.31
PDCD4-204ENST00000462577 HMGB2P26583 209 aaKnown RBP6.88□□□□□ -1.31
PDCD4-204ENST00000462577 PRKAR2BP31323 418 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 TRIM67Q6ZTA4 783 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 RIC3Q7Z5B4 369 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 DEFB132Q7Z7B7 95 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 CCDC24Q8N4L8 307 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 PDZRN3Q9UPQ7 1066 aa6.88□□□□□ -1.31
PDCD4-204ENST00000462577 NRXN2Q9P2S2 1712 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 SPTLC1O15269 473 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 JUNDP17535 347 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 EZH2Q15910 746 aaKnown RBP6.87□□□□□ -1.31
PDCD4-204ENST00000462577 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
PDCD4-204ENST00000462577 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 PHACTR3Q96KR7 559 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 TMOD3Q9NYL9 352 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
PDCD4-204ENST00000462577 MAPK8IP3Q9UPT6 1336 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 RNMTO43148 476 aaKnown RBP6.86□□□□□ -1.31
PDCD4-204ENST00000462577 RPIAP49247 311 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 MTMR2Q13614 643 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 TXNRD1Q16881 649 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 Q6ZNB5 142 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 PIGBQ92521 554 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 LIMD1Q9UGP4 676 aa6.86□□□□□ -1.31
PDCD4-204ENST00000462577 LAMB2P55268 1798 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 ZBTB24O43167 697 aaPredicted RBP6.85□□□□□ -1.31
PDCD4-204ENST00000462577 CD2BP2O95400 341 aaKnown RBP6.85□□□□□ -1.31
PDCD4-204ENST00000462577 NEFMP07197 916 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 GJA5P36382 358 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 LAPTM4AQ15012 233 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 WDR43Q15061 677 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDCD4-204ENST00000462577 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 TPRNQ4KMQ1 711 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 MPRIPQ6WCQ1 1025 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 SLC52A2Q9HAB3 445 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 ATG3Q9NT62 314 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 CACNA1SQ13698 1873 aa6.85□□□□□ -1.31
PDCD4-204ENST00000462577 TNFRSF10AO00220 468 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 NRG2O14511 850 aaPredicted RBP6.84□□□□□ -1.31
PDCD4-204ENST00000462577 CABP4P57796 275 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 CCDC184Q52MB2 194 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 IL17REQ8NFR9 667 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 PNISRQ8TF01 805 aaKnown RBP6.84□□□□□ -1.31
PDCD4-204ENST00000462577 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
PDCD4-204ENST00000462577 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms