RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-207ENST00000462321 CCDC57Q2TAC2 916 aa24.58■■□□□ 1.53
PTPN18-207ENST00000462321 ERFEQ4G0M1 354 aa24.58■■□□□ 1.53
PTPN18-207ENST00000462321 TPTE2Q6XPS3 522 aa24.58■■□□□ 1.53
PTPN18-207ENST00000462321 KLHDC4Q8TBB5 520 aa24.58■■□□□ 1.53
PTPN18-207ENST00000462321 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.53
PTPN18-207ENST00000462321 DDX60Q8IY21 1712 aaKnown RBP24.58■■□□□ 1.53
PTPN18-207ENST00000462321 GTF2E1P29083 439 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-207ENST00000462321 IFIT5Q13325 482 aaKnown RBP24.57■■□□□ 1.52
PTPN18-207ENST00000462321 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
PTPN18-207ENST00000462321 SIL1Q9H173 461 aa24.57■■□□□ 1.52
PTPN18-207ENST00000462321 MYH3P11055 1940 aa24.57■■□□□ 1.52
PTPN18-207ENST00000462321 GREM2Q9H772 168 aa24.56■■□□□ 1.52
PTPN18-207ENST00000462321 ABCC12Q96J65 1359 aa24.56■■□□□ 1.52
PTPN18-207ENST00000462321 TM4SF1P30408 202 aa24.55■■□□□ 1.52
PTPN18-207ENST00000462321 QSER1Q2KHR3 1735 aa24.55■■□□□ 1.52
PTPN18-207ENST00000462321 RTL9Q8NET4 1388 aa24.55■■□□□ 1.52
PTPN18-207ENST00000462321 MSH5O43196 834 aa24.55■■□□□ 1.52
PTPN18-207ENST00000462321 CCDC85AQ96PX6 553 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-207ENST00000462321 FBXO3Q9UK99 471 aa24.55■■□□□ 1.52
PTPN18-207ENST00000462321 ITGA6P23229 1130 aa24.54■■□□□ 1.52
PTPN18-207ENST00000462321 CCDC152Q4G0S7 254 aa24.54■■□□□ 1.52
PTPN18-207ENST00000462321 NLGN1Q8N2Q7 840 aa24.54■■□□□ 1.52
PTPN18-207ENST00000462321 ANKRD18BA2A2Z9 1011 aa24.53■■□□□ 1.52
PTPN18-207ENST00000462321 SASH1O94885 1247 aa24.53■■□□□ 1.52
PTPN18-207ENST00000462321 IL1RAPL2Q9NP60 686 aa24.53■■□□□ 1.52
PTPN18-207ENST00000462321 CIAO1O76071 339 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 C16orf71Q8IYS4 520 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-207ENST00000462321 CNBD1Q8NA66 436 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 EYA2O00167 538 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 SF3B3Q15393 1217 aaKnown RBP24.52■■□□□ 1.52
PTPN18-207ENST00000462321 TAF7LQ5H9L4 462 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 PLEKHM2Q8IWE5 1019 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 ZNF594Q96JF6 807 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-207ENST00000462321 RIC1Q4ADV7 1423 aa24.52■■□□□ 1.52
PTPN18-207ENST00000462321 NPHP1O15259 732 aa24.51■■□□□ 1.51
PTPN18-207ENST00000462321 CLASRPQ8N2M8 674 aaKnown RBP24.51■■□□□ 1.51
PTPN18-207ENST00000462321 POLRMTO00411 1230 aaKnown RBP24.5■■□□□ 1.51
PTPN18-207ENST00000462321 LRP5O75197 1615 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 SERPINB2P05120 415 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 IL15P40933 162 aaPredicted RBP24.5■■□□□ 1.51
PTPN18-207ENST00000462321 DDR1Q08345 913 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 ATG9AQ7Z3C6 839 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 OTUD7AQ8TE49 926 aaPredicted RBP24.5■■□□□ 1.51
PTPN18-207ENST00000462321 SALL3Q9BXA9 1300 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 BCL11AQ9H165 835 aa24.5■■□□□ 1.51
PTPN18-207ENST00000462321 PRR5LQ6MZQ0 368 aa24.49■■□□□ 1.51
PTPN18-207ENST00000462321 NLRP3Q96P20 1036 aa24.49■■□□□ 1.51
PTPN18-207ENST00000462321 C3orf67Q6ZVT6 689 aa24.48■■□□□ 1.51
PTPN18-207ENST00000462321 ST5P78524 1137 aa24.47■■□□□ 1.51
PTPN18-207ENST00000462321 LRRC24Q50LG9 513 aa24.47■■□□□ 1.51
PTPN18-207ENST00000462321 OSBPL3Q9H4L5 887 aa24.47■■□□□ 1.51
PTPN18-207ENST00000462321 MX1P20591 662 aa24.47■■□□□ 1.51
PTPN18-207ENST00000462321 PDE1AP54750 535 aa24.46■■□□□ 1.51
PTPN18-207ENST00000462321 TFCP2Q12800 502 aa24.46■■□□□ 1.51
PTPN18-207ENST00000462321 PUS3Q9BZE2 481 aaKnown RBP24.46■■□□□ 1.51
PTPN18-207ENST00000462321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.46■■□□□ 1.51
PTPN18-207ENST00000462321 LDHAL6AQ6ZMR3 332 aa24.45■■□□□ 1.5
PTPN18-207ENST00000462321 CCDC24Q8N4L8 307 aa24.45■■□□□ 1.5
PTPN18-207ENST00000462321 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.52e-7■■□□□ 14.5
PTPN18-207ENST00000462321 SEC31BQ9NQW1 1179 aa24.45■■□□□ 1.5
PTPN18-207ENST00000462321 STAP2Q9UGK3 403 aa24.45■■□□□ 1.5
PTPN18-207ENST00000462321 AOX1Q06278 1338 aa24.45■■□□□ 1.5
PTPN18-207ENST00000462321 BMP2KLQ5H9B9 411 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 AACSQ86V21 672 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 CDC5LQ99459 802 aaKnown RBP24.44■■□□□ 1.5
PTPN18-207ENST00000462321 TNRC6CQ9HCJ0 1690 aaKnown RBP24.44■■□□□ 1.5
PTPN18-207ENST00000462321 MMP10P09238 476 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 IFIT2P09913 472 aaKnown RBP24.44■■□□□ 1.5
PTPN18-207ENST00000462321 TNNI3KQ59H18 835 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 EAF2Q96CJ1 260 aaPredicted RBP24.44■■□□□ 1.5
PTPN18-207ENST00000462321 GPR108Q9NPR9 543 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 RIPOR2Q9Y4F9 1068 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 FPGT-TNNI3KV9GXZ4 949 aa24.44■■□□□ 1.5
PTPN18-207ENST00000462321 NRXN2Q9P2S2 1712 aa24.43■■□□□ 1.5
PTPN18-207ENST00000462321 IGHMBP2P38935 993 aaKnown RBP24.43■■□□□ 1.5
PTPN18-207ENST00000462321 TTC22Q5TAA0 569 aa24.43■■□□□ 1.5
PTPN18-207ENST00000462321 CNNM1Q9NRU3 951 aa24.43■■□□□ 1.5
PTPN18-207ENST00000462321 MSL1Q68DK7 614 aa24.42■■□□□ 1.5
PTPN18-207ENST00000462321 CEP126Q9P2H0 1117 aa24.42■■□□□ 1.5
PTPN18-207ENST00000462321 MPHOSPH8Q99549 860 aa24.41■■□□□ 1.5
PTPN18-207ENST00000462321 PARP3Q9Y6F1 533 aa24.41■■□□□ 1.5
PTPN18-207ENST00000462321 CASZ1Q86V15 1759 aa24.41■■□□□ 1.5
PTPN18-207ENST00000462321 TTC41PQ6P2S7 1318 aa24.41■■□□□ 1.5
PTPN18-207ENST00000462321 GPATCH3Q96I76 525 aa24.41■■□□□ 1.5
PTPN18-207ENST00000462321 ZNF609O15014 1411 aa24.4■■□□□ 1.5
PTPN18-207ENST00000462321 GSPT1P15170 499 aaKnown RBP24.4■■□□□ 1.5
PTPN18-207ENST00000462321 ANKRD18AQ8IVF6 992 aa24.4■■□□□ 1.5
PTPN18-207ENST00000462321 MROH5Q6ZUA9 1318 aa24.4■■□□□ 1.5
PTPN18-207ENST00000462321 METTL24Q5JXM2 366 aa24.39■■□□□ 1.5
PTPN18-207ENST00000462321 CRY2Q49AN0 593 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 SLC16A10Q8TF71 515 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 CCDC8Q9H0W5 538 aaPredicted RBP24.38■■□□□ 1.49
PTPN18-207ENST00000462321 AKAP2Q9Y2D5 859 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 C8orf34Q49A92 452 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 TSHZ3Q63HK5 1081 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 DDX46Q7L014 1031 aaKnown RBP24.38■■□□□ 1.49
PTPN18-207ENST00000462321 ECHDC1Q9NTX5 307 aa24.38■■□□□ 1.49
PTPN18-207ENST00000462321 KLRG2A4D1S0 409 aaPredicted RBP24.37■■□□□ 1.49
PTPN18-207ENST00000462321 VGLL2Q8N8G2 317 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms