RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
LINC00879-201ENST00000462219 ABCC4O15439 1325 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
LINC00879-201ENST00000462219 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
LINC00879-201ENST00000462219 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 SLC51AQ86UW1 340 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
LINC00879-201ENST00000462219 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
LINC00879-201ENST00000462219 CSF1RP07333 972 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
LINC00879-201ENST00000462219 CTSWP56202 376 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 FOXO4P98177 505 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
LINC00879-201ENST00000462219 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
LINC00879-201ENST00000462219 CCT4P50991 539 aaKnown RBP16.43■□□□□ 0.22
LINC00879-201ENST00000462219 GRAPQ13588 217 aa16.43■□□□□ 0.22
LINC00879-201ENST00000462219 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
LINC00879-201ENST00000462219 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
LINC00879-201ENST00000462219 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
LINC00879-201ENST00000462219 C9orf78Q9NZ63 289 aaPredicted RBP16.43■□□□□ 0.22
LINC00879-201ENST00000462219 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
LINC00879-201ENST00000462219 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 NFKBIEO00221 500 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 BBOX1O75936 387 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 PRELPP51888 382 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 SUCLG2Q96I99 432 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
LINC00879-201ENST00000462219 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
LINC00879-201ENST00000462219 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
LINC00879-201ENST00000462219 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
LINC00879-201ENST00000462219 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
LINC00879-201ENST00000462219 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
LINC00879-201ENST00000462219 GREM2Q9H772 168 aa16.41■□□□□ 0.22
LINC00879-201ENST00000462219 RASSF7Q02833 373 aa16.4■□□□□ 0.22
LINC00879-201ENST00000462219 SP8Q8IXZ3 490 aa16.4■□□□□ 0.22
LINC00879-201ENST00000462219 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
LINC00879-201ENST00000462219 RLBP1P12271 317 aa16.39■□□□□ 0.21
LINC00879-201ENST00000462219 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
LINC00879-201ENST00000462219 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
LINC00879-201ENST00000462219 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
LINC00879-201ENST00000462219 CC2D2BQ6DHV5 1058 aa16.39■□□□□ 0.21
LINC00879-201ENST00000462219 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
LINC00879-201ENST00000462219 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
LINC00879-201ENST00000462219 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
LINC00879-201ENST00000462219 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
LINC00879-201ENST00000462219 LTBP3Q9NS15 1303 aa16.38■□□□□ 0.21
LINC00879-201ENST00000462219 PLIN1O60240 522 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 ITGA6P23229 1130 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 FAM161AQ3B820 660 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
LINC00879-201ENST00000462219 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 DZIP1LQ8IYY4 767 aaKnown RBP16.37■□□□□ 0.21
LINC00879-201ENST00000462219 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 MEIS3Q99687 375 aa16.37■□□□□ 0.21
LINC00879-201ENST00000462219 BICC1Q9H694 974 aaKnown RBP16.37■□□□□ 0.21
LINC00879-201ENST00000462219 DUOX1Q9NRD9 1551 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00879-201ENST00000462219 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
LINC00879-201ENST00000462219 PSMD1Q99460 953 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
LINC00879-201ENST00000462219 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
LINC00879-201ENST00000462219 LMNB1P20700 586 aa16.34■□□□□ 0.21
LINC00879-201ENST00000462219 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
LINC00879-201ENST00000462219 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
LINC00879-201ENST00000462219 BSDC1Q9NW68 430 aaPredicted RBP16.34■□□□□ 0.21
LINC00879-201ENST00000462219 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
LINC00879-201ENST00000462219 GPSM2P81274 684 aa16.33■□□□□ 0.2
LINC00879-201ENST00000462219 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
LINC00879-201ENST00000462219 MPNDQ8N594 471 aa16.33■□□□□ 0.2
LINC00879-201ENST00000462219 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
LINC00879-201ENST00000462219 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
LINC00879-201ENST00000462219 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
LINC00879-201ENST00000462219 GNAI3P08754 354 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 YY1P25490 414 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 COL4A5P29400 1685 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
LINC00879-201ENST00000462219 ZNF594Q96JF6 807 aaPredicted RBP16.32■□□□□ 0.2
LINC00879-201ENST00000462219 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
LINC00879-201ENST00000462219 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
LINC00879-201ENST00000462219 LRRFIP2Q9Y608 721 aaKnown RBP16.32■□□□□ 0.2
LINC00879-201ENST00000462219 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
LINC00879-201ENST00000462219 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
LINC00879-201ENST00000462219 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
LINC00879-201ENST00000462219 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
LINC00879-201ENST00000462219 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
LINC00879-201ENST00000462219 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms