RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ELNP15502 786 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 PCBP4P57723 403 aaKnown RBP5.13□□□□□ -1.59
HDAC6-212ENST00000461608 COL19A1Q14993 1142 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 TEAD4Q15561 434 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 MCTP1Q6DN14 999 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 DNAJC14Q6Y2X3 702 aaPredicted RBP5.13□□□□□ -1.59
HDAC6-212ENST00000461608 NLRP8Q86W28 1048 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
HDAC6-212ENST00000461608 CHMP7Q8WUX9 453 aaPredicted RBP5.13□□□□□ -1.59
HDAC6-212ENST00000461608 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 NDUFB5O43674 189 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 ITGAEP38570 1179 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 FGD1P98174 961 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 NEUROD1Q13562 356 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 RTN1Q16799 776 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 FOXD4L6Q3SYB3 417 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-212ENST00000461608 ARSJQ5FYB0 599 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-212ENST00000461608 FAM182BQ5T319 152 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 FOXD4L3Q6VB84 417 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-212ENST00000461608 C7orf43Q8WVR3 580 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 ASB16Q96NS5 453 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 CITED4Q96RK1 184 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 MDFIQ99750 246 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 CABP1Q9NZU7 370 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 SEPT3Q9UH03 358 aa5.12□□□□□ -1.59
HDAC6-212ENST00000461608 EML1O00423 815 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 FAM157BP0CG42 384 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 MAPK1P28482 360 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 NRG1Q02297 640 aaPredicted RBP5.11□□□□□ -1.59
HDAC6-212ENST00000461608 NBPF1Q3BBV0 1214 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 C1orf53Q5VUE5 145 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 RGL4Q8IZJ4 473 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 ZDHHC3Q9NYG2 299 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 STIM2Q9P246 746 aa5.11□□□□□ -1.59
HDAC6-212ENST00000461608 ELOA3CA0A087WX78 387 aaPredicted RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 RBM47A0AV96 593 aaKnown RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ELOA3DA6NLF2 546 aaPredicted RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 TATP17735 454 aaPredicted RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 BRD2P25440 801 aaKnown RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 NOS2P35228 1153 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ARHGAP4P98171 946 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ELOA3BQ3SY89 546 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ZNF468Q5VIY5 522 aaPredicted RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ELOA3Q8NG57 546 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 FOXD4L4Q8WXT5 416 aaPredicted RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 RBCK1Q9BYM8 510 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 QTRT2Q9H974 415 aaKnown RBP5.1□□□□□ -1.59
HDAC6-212ENST00000461608 FAM13BQ9NYF5 915 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 ZNF232Q9UNY5 417 aa5.1□□□□□ -1.59
HDAC6-212ENST00000461608 E9PSI1 815 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 LGR5O75473 907 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 SCNN1AP37088 669 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 USP5P45974 858 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 IRAK1P51617 712 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 SFSWAPQ12872 951 aaKnown RBP5.09□□□□□ -1.59
HDAC6-212ENST00000461608 PDE3BQ13370 1112 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 COL9A3Q14050 684 aaPredicted RBP5.09□□□□□ -1.59
HDAC6-212ENST00000461608 NAA30Q147X3 362 aaPredicted RBP5.09□□□□□ -1.59
HDAC6-212ENST00000461608 NOM1Q5C9Z4 860 aaKnown RBP5.09□□□□□ -1.59
HDAC6-212ENST00000461608 LRRC69Q6ZNQ3 347 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 ALDH16A1Q8IZ83 802 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 L3MBTL2Q969R5 705 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 TP53INP1Q96A56 240 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 DMRTB1Q96MA1 342 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 SLC30A3Q99726 388 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 ANO2Q9NQ90 1003 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 PCMTD2Q9NV79 361 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 BRPF3Q9ULD4 1205 aa5.09□□□□□ -1.59
HDAC6-212ENST00000461608 ANKRD33BA6NCL7 494 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 RPLP1P05386 114 aaKnown RBP5.08□□□□□ -1.6
HDAC6-212ENST00000461608 MPSTP25325 297 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 RBM25P49756 843 aaKnown RBP5.08□□□□□ -1.6
HDAC6-212ENST00000461608 RAC1P63000 192 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 C11orf91Q3C1V1 193 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 ZNF326Q5BKZ1 582 aaKnown RBP5.08□□□□□ -1.6
HDAC6-212ENST00000461608 COX20Q5RI15 118 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 TRAPPC3LQ5T215 181 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 SAMD5Q5TGI4 173 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 C8orf86Q6ZUL3 223 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 RAB44Q7Z6P3 723 aaPredicted RBP5.08□□□□□ -1.6
HDAC6-212ENST00000461608 NPAS4Q8IUM7 802 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 BCL2L13Q9BXK5 485 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 NEUROD4Q9HD90 331 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 MARK1Q9P0L2 795 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 STARD13Q9Y3M8 1113 aa5.08□□□□□ -1.6
HDAC6-212ENST00000461608 M0R082 166 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 TNFRSF10BO14763 440 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 PCSK2P16519 638 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 EIF1AXP47813 144 aaKnown RBP5.07□□□□□ -1.6
HDAC6-212ENST00000461608 EHHADHQ08426 723 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 MTMR3Q13615 1198 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 IER5Q5VY09 327 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 BICDL1Q6ZP65 573 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 CAPN12Q6ZSI9 719 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 SYT9Q86SS6 491 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 TXNRD3Q86VQ6 643 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 ZNF417Q8TAU3 575 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms