RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ADAMTSL1Q8N6G6 1762 aa20■□□□□ 0.79
NUP50-213ENST00000461437 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
NUP50-213ENST00000461437 CHADLQ6NUI6 762 aa19.99■□□□□ 0.79
NUP50-213ENST00000461437 SP8Q8IXZ3 490 aa19.99■□□□□ 0.79
NUP50-213ENST00000461437 CCDC85AQ96PX6 553 aaPredicted RBP19.99■□□□□ 0.79
NUP50-213ENST00000461437 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
NUP50-213ENST00000461437 MYH3P11055 1940 aa19.99■□□□□ 0.79
NUP50-213ENST00000461437 BBOX1O75936 387 aa19.98■□□□□ 0.79
NUP50-213ENST00000461437 EIF6P56537 245 aaKnown RBP19.98■□□□□ 0.79
NUP50-213ENST00000461437 DPP8Q6V1X1 898 aaPredicted RBP19.98■□□□□ 0.79
NUP50-213ENST00000461437 MPNDQ8N594 471 aa19.98■□□□□ 0.79
NUP50-213ENST00000461437 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
NUP50-213ENST00000461437 TMX4Q9H1E5 349 aaPredicted RBP19.98■□□□□ 0.79
NUP50-213ENST00000461437 HACL1Q9UJ83 578 aa19.98■□□□□ 0.79
NUP50-213ENST00000461437 CACNA1FO60840 1977 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 PI4KAP2A4QPH2 592 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 EPHX2P34913 555 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
NUP50-213ENST00000461437 SF3B3Q15393 1217 aaKnown RBP19.97■□□□□ 0.79
NUP50-213ENST00000461437 NIM1KQ8IY84 436 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 PI4KAP1Q8N8J0 262 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 SEC31BQ9NQW1 1179 aa19.97■□□□□ 0.79
NUP50-213ENST00000461437 GPC2Q8N158 579 aa19.96■□□□□ 0.79
NUP50-213ENST00000461437 ZBTB38Q8NAP3 1195 aaPredicted RBP19.96■□□□□ 0.79
NUP50-213ENST00000461437 KLRG1Q96E93 195 aa19.96■□□□□ 0.79
NUP50-213ENST00000461437 GPR101Q96P66 508 aaPredicted RBP19.96■□□□□ 0.79
NUP50-213ENST00000461437 IL16Q14005 1332 aa19.96■□□□□ 0.79
NUP50-213ENST00000461437 IGKV5-2P06315 115 aa19.95■□□□□ 0.78
NUP50-213ENST00000461437 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
NUP50-213ENST00000461437 GRIPAP1Q4V328 841 aa19.95■□□□□ 0.78
NUP50-213ENST00000461437 STK31Q9BXU1 1019 aa19.95■□□□□ 0.78
NUP50-213ENST00000461437 RTFDC1Q9BY42 306 aaPredicted RBP19.95■□□□□ 0.78
NUP50-213ENST00000461437 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
NUP50-213ENST00000461437 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
NUP50-213ENST00000461437 DDX58O95786 925 aaKnown RBP19.94■□□□□ 0.78
NUP50-213ENST00000461437 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
NUP50-213ENST00000461437 EPS15P42566 896 aa19.94■□□□□ 0.78
NUP50-213ENST00000461437 SCNN1DP51172 638 aa19.94■□□□□ 0.78
NUP50-213ENST00000461437 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
NUP50-213ENST00000461437 KSR2Q6VAB6 950 aa19.94■□□□□ 0.78
NUP50-213ENST00000461437 LDHDQ86WU2 507 aa19.94■□□□□ 0.78
NUP50-213ENST00000461437 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
NUP50-213ENST00000461437 GPSM2P81274 684 aa19.93■□□□□ 0.78
NUP50-213ENST00000461437 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
NUP50-213ENST00000461437 RIMBP2O15034 1052 aa19.92■□□□□ 0.78
NUP50-213ENST00000461437 CXCL9Q07325 125 aa19.92■□□□□ 0.78
NUP50-213ENST00000461437 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
NUP50-213ENST00000461437 SUPT20HQ8NEM7 779 aa19.92■□□□□ 0.78
NUP50-213ENST00000461437 NSFL1CQ9UNZ2 370 aaKnown RBP19.92■□□□□ 0.78
NUP50-213ENST00000461437 SCN9AQ15858 1988 aa19.92■□□□□ 0.78
NUP50-213ENST00000461437 VAMP4O75379 141 aa19.91■□□□□ 0.78
NUP50-213ENST00000461437 RAD17O75943 681 aa19.91■□□□□ 0.78
NUP50-213ENST00000461437 KIAA2012Q0VF49 1180 aa19.91■□□□□ 0.78
NUP50-213ENST00000461437 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
NUP50-213ENST00000461437 ZNRF3Q9ULT6 936 aa19.91■□□□□ 0.78
NUP50-213ENST00000461437 YDJCA8MPS7 323 aa19.9■□□□□ 0.78
NUP50-213ENST00000461437 PDE8AO60658 829 aa19.9■□□□□ 0.78
NUP50-213ENST00000461437 LMOD1P29536 600 aaPredicted RBP19.9■□□□□ 0.78
NUP50-213ENST00000461437 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.78
NUP50-213ENST00000461437 FLIIQ13045 1269 aa19.9■□□□□ 0.78
NUP50-213ENST00000461437 POLLQ9UGP5 575 aa19.9■□□□□ 0.78
NUP50-213ENST00000461437 SHTN1A0MZ66 631 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 NEURL1BA8MQ27 555 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 C6orf229H3BNL8 230 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 PCNTO95613 3336 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 RPS8P62241 208 aaKnown RBP19.89■□□□□ 0.77
NUP50-213ENST00000461437 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
NUP50-213ENST00000461437 JMYQ8N9B5 988 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 PASKQ96RG2 1323 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 DBNDD1Q9H9R9 158 aa19.89■□□□□ 0.77
NUP50-213ENST00000461437 MKRN1Q9UHC7 482 aaKnown RBP19.89■□□□□ 0.77
NUP50-213ENST00000461437 ITGBL1O95965 494 aaPredicted RBP19.88■□□□□ 0.77
NUP50-213ENST00000461437 GMPSP49915 693 aaPredicted RBP19.88■□□□□ 0.77
NUP50-213ENST00000461437 FKBP5Q13451 457 aaPredicted RBP19.88■□□□□ 0.77
NUP50-213ENST00000461437 NEXNQ0ZGT2 675 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 DOK7Q18PE1 504 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 CCDC152Q4G0S7 254 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 CIAPIN1Q6FI81 312 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 TMC4Q7Z404 712 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 VPS33BQ9H267 617 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 KCNQ5Q9NR82 932 aa19.87■□□□□ 0.77
NUP50-213ENST00000461437 TRPM7Q96QT4 1865 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 CDHR2Q9BYE9 1310 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 F6X3S4 739 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 WASHC4Q2M389 1173 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 UBE3BQ7Z3V4 1068 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 PNMA8AQ86V59 439 aaPredicted RBP19.86■□□□□ 0.77
NUP50-213ENST00000461437 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 TBC1D16Q8TBP0 767 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 GPRC5DQ9NZD1 345 aa19.86■□□□□ 0.77
NUP50-213ENST00000461437 POLR2AP24928 1970 aaKnown RBP19.86■□□□□ 0.77
NUP50-213ENST00000461437 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
NUP50-213ENST00000461437 CTSWP56202 376 aa19.85■□□□□ 0.77
NUP50-213ENST00000461437 GREM2Q9H772 168 aa19.85■□□□□ 0.77
NUP50-213ENST00000461437 ZBTB12Q9Y330 459 aaPredicted RBP19.85■□□□□ 0.77
NUP50-213ENST00000461437 COL13A1Q5TAT6 717 aaPredicted RBP19.84■□□□□ 0.77
NUP50-213ENST00000461437 DNAAF4Q8WXU2 420 aa19.84■□□□□ 0.77
NUP50-213ENST00000461437 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms