RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
SSBP1-202ENST00000461433 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 TTLL11Q8NHH1 800 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 CACNA1SQ13698 1873 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 HSP90B1P14625 803 aaKnown RBP14.2□□□□□ -0.14
SSBP1-202ENST00000461433 NPR1P16066 1061 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 CTSWP56202 376 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 MVPQ14764 893 aaKnown RBP14.2□□□□□ -0.14
SSBP1-202ENST00000461433 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
SSBP1-202ENST00000461433 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
SSBP1-202ENST00000461433 ANKRD44Q8N8A2 993 aa14.19□□□□□ -0.14
SSBP1-202ENST00000461433 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
SSBP1-202ENST00000461433 GNAI3P08754 354 aa14.18□□□□□ -0.14
SSBP1-202ENST00000461433 UBTFL1P0CB47 393 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-202ENST00000461433 RABL6Q3YEC7 729 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-202ENST00000461433 ZNF622Q969S3 477 aaKnown RBP eCLIP14.18□□□□□ -0.14
SSBP1-202ENST00000461433 BICC1Q9H694 974 aaKnown RBP14.18□□□□□ -0.14
SSBP1-202ENST00000461433 LMBR1LQ6UX01 489 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 RPGRQ92834 1020 aaKnown RBP14.17□□□□□ -0.14
SSBP1-202ENST00000461433 CCDC85AQ96PX6 553 aaPredicted RBP14.17□□□□□ -0.14
SSBP1-202ENST00000461433 CRAMP1Q96RY5 1269 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 GREM2Q9H772 168 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 PIM2Q9P1W9 311 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 LRRFIP2Q9Y608 721 aaKnown RBP14.17□□□□□ -0.14
SSBP1-202ENST00000461433 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 WWC3Q9ULE0 1092 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
SSBP1-202ENST00000461433 GOLGB1Q14789 3259 aaKnown RBP14.17□□□□□ -0.14
SSBP1-202ENST00000461433 ARFGEF1Q9Y6D6 1849 aa14.16□□□□□ -0.14
SSBP1-202ENST00000461433 TTLL6Q8N841 843 aa14.16□□□□□ -0.14
SSBP1-202ENST00000461433 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
SSBP1-202ENST00000461433 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
SSBP1-202ENST00000461433 ZBTB40Q9NUA8 1239 aa14.16□□□□□ -0.14
SSBP1-202ENST00000461433 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
SSBP1-202ENST00000461433 FAM161AQ3B820 660 aa14.15□□□□□ -0.14
SSBP1-202ENST00000461433 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
SSBP1-202ENST00000461433 DDX46Q7L014 1031 aaKnown RBP14.15□□□□□ -0.14
SSBP1-202ENST00000461433 SLC51AQ86UW1 340 aa14.15□□□□□ -0.14
SSBP1-202ENST00000461433 CELF1Q92879 486 aaKnown RBP14.15□□□□□ -0.14
SSBP1-202ENST00000461433 GNAI2P04899 355 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 GRAPQ13588 217 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 DALRD3Q5D0E6 543 aaKnown RBP14.14□□□□□ -0.15
SSBP1-202ENST00000461433 GRAPLQ8TC17 118 aaPredicted RBP14.14□□□□□ -0.15
SSBP1-202ENST00000461433 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 SPEF2Q9C093 1822 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 YBX3P16989 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
SSBP1-202ENST00000461433 ITGA6P23229 1130 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 HDAC5Q9UQL6 1122 aa14.14□□□□□ -0.15
SSBP1-202ENST00000461433 MTX1Q13505 466 aa14.13□□□□□ -0.15
SSBP1-202ENST00000461433 BCS1LQ9Y276 419 aa14.13□□□□□ -0.15
SSBP1-202ENST00000461433 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
SSBP1-202ENST00000461433 BBOX1O75936 387 aa14.12□□□□□ -0.15
SSBP1-202ENST00000461433 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
SSBP1-202ENST00000461433 RFX5P48382 616 aaPredicted RBP14.12□□□□□ -0.15
SSBP1-202ENST00000461433 RPS8P62241 208 aaKnown RBP14.12□□□□□ -0.15
SSBP1-202ENST00000461433 OLFM4Q6UX06 510 aa14.12□□□□□ -0.15
SSBP1-202ENST00000461433 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
SSBP1-202ENST00000461433 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
SSBP1-202ENST00000461433 C21orf2O43822 256 aa14.11□□□□□ -0.15
SSBP1-202ENST00000461433 IFIT5Q13325 482 aaKnown RBP14.11□□□□□ -0.15
SSBP1-202ENST00000461433 SNED1Q8TER0 1413 aa14.11□□□□□ -0.15
SSBP1-202ENST00000461433 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
SSBP1-202ENST00000461433 CCDC57Q2TAC2 916 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 ZNF594Q96JF6 807 aaPredicted RBP14.1□□□□□ -0.15
SSBP1-202ENST00000461433 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
SSBP1-202ENST00000461433 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
SSBP1-202ENST00000461433 ATP6V0A2Q9Y487 856 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 ATP8B2P98198 1209 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 ANKRD18AQ8IVF6 992 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 SP8Q8IXZ3 490 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 KLHDC4Q8TBB5 520 aa14.1□□□□□ -0.15
SSBP1-202ENST00000461433 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
SSBP1-202ENST00000461433 IRX6P78412 446 aaPredicted RBP14.09□□□□□ -0.15
SSBP1-202ENST00000461433 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
SSBP1-202ENST00000461433 EXOC6Q8TAG9 804 aa14.09□□□□□ -0.15
SSBP1-202ENST00000461433 BSDC1Q9NW68 430 aaPredicted RBP14.09□□□□□ -0.15
SSBP1-202ENST00000461433 A0A1B0GUL6 1792 aa14.08□□□□□ -0.15
SSBP1-202ENST00000461433 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 SRGAP3O43295 1099 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 POLA2Q14181 598 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 GPR162Q16538 588 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 TMC4Q7Z404 712 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 SIRT2Q8IXJ6 389 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
SSBP1-202ENST00000461433 SSH3Q8TE77 659 aa14.08□□□□□ -0.16
SSBP1-202ENST00000461433 IGHMBP2P38935 993 aaKnown RBP14.07□□□□□ -0.16
SSBP1-202ENST00000461433 PUS3Q9BZE2 481 aaKnown RBP14.07□□□□□ -0.16
SSBP1-202ENST00000461433 MINPP1Q9UNW1 487 aa14.07□□□□□ -0.16
SSBP1-202ENST00000461433 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
SSBP1-202ENST00000461433 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
SSBP1-202ENST00000461433 RIPOR2Q9Y4F9 1068 aa14.07□□□□□ -0.16
SSBP1-202ENST00000461433 UTRNP46939 3433 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms