RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HSP90B1P14625 803 aaKnown RBP19.69■□□□□ 0.74
VARS-219ENST00000461328 SF3B3Q15393 1217 aaKnown RBP19.69■□□□□ 0.74
VARS-219ENST00000461328 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
VARS-219ENST00000461328 SP8Q8IXZ3 490 aa19.69■□□□□ 0.74
VARS-219ENST00000461328 PI4KAP2A4QPH2 592 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 PPIP5K2O43314 1243 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 VAMP4O75379 141 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 EIF6P56537 245 aaKnown RBP19.68■□□□□ 0.74
VARS-219ENST00000461328 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
VARS-219ENST00000461328 MPNDQ8N594 471 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 PI4KAP1Q8N8J0 262 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 SUPT20HQ8NEM7 779 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 L3MBTL3Q96JM7 780 aaPredicted RBP19.68■□□□□ 0.74
VARS-219ENST00000461328 CEP350Q5VT06 3117 aa19.68■□□□□ 0.74
VARS-219ENST00000461328 PCCAP05165 728 aaPredicted RBP19.67■□□□□ 0.74
VARS-219ENST00000461328 NEXNQ0ZGT2 675 aa19.67■□□□□ 0.74
VARS-219ENST00000461328 FLIIQ13045 1269 aa19.67■□□□□ 0.74
VARS-219ENST00000461328 G2E3Q7L622 706 aa19.67■□□□□ 0.74
VARS-219ENST00000461328 TMC4Q7Z404 712 aa19.67■□□□□ 0.74
VARS-219ENST00000461328 NIM1KQ8IY84 436 aa19.67■□□□□ 0.74
VARS-219ENST00000461328 COL4A5P29400 1685 aa19.66■□□□□ 0.74
VARS-219ENST00000461328 E9PSI1 815 aa19.66■□□□□ 0.74
VARS-219ENST00000461328 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
VARS-219ENST00000461328 MIER1Q8N108 512 aa19.66■□□□□ 0.74
VARS-219ENST00000461328 GPC2Q8N158 579 aa19.66■□□□□ 0.74
VARS-219ENST00000461328 AOC3Q16853 763 aa19.65■□□□□ 0.74
VARS-219ENST00000461328 JARID2Q92833 1246 aaPredicted RBP19.65■□□□□ 0.74
VARS-219ENST00000461328 CELF1Q92879 486 aaKnown RBP19.65■□□□□ 0.74
VARS-219ENST00000461328 RTFDC1Q9BY42 306 aaPredicted RBP19.65■□□□□ 0.74
VARS-219ENST00000461328 VPS33BQ9H267 617 aa19.65■□□□□ 0.74
VARS-219ENST00000461328 GJA3Q9Y6H8 435 aa19.65■□□□□ 0.74
VARS-219ENST00000461328 TAF1P21675 1872 aa19.65■□□□□ 0.74
VARS-219ENST00000461328 TAF1DQ9H5J8 278 aaPredicted RBP19.64■□□□□ 0.73
VARS-219ENST00000461328 HACL1Q9UJ83 578 aa19.64■□□□□ 0.73
VARS-219ENST00000461328 SCN4AP35499 1836 aa19.63■□□□□ 0.73
VARS-219ENST00000461328 PDE8AO60658 829 aa19.63■□□□□ 0.73
VARS-219ENST00000461328 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
VARS-219ENST00000461328 CHADLQ6NUI6 762 aa19.63■□□□□ 0.73
VARS-219ENST00000461328 POTEIP0CG38 1075 aa19.62■□□□□ 0.73
VARS-219ENST00000461328 POTEJP0CG39 1038 aa19.62■□□□□ 0.73
VARS-219ENST00000461328 CWF19L2Q2TBE0 894 aaKnown RBP19.62■□□□□ 0.73
VARS-219ENST00000461328 CCDC152Q4G0S7 254 aa19.62■□□□□ 0.73
VARS-219ENST00000461328 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
VARS-219ENST00000461328 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
VARS-219ENST00000461328 NEURL1BA8MQ27 555 aa19.61■□□□□ 0.73
VARS-219ENST00000461328 EPHX2P34913 555 aa19.61■□□□□ 0.73
VARS-219ENST00000461328 RPS8P62241 208 aaKnown RBP19.61■□□□□ 0.73
VARS-219ENST00000461328 HTRA3P83110 453 aa19.61■□□□□ 0.73
VARS-219ENST00000461328 EAPPQ56P03 285 aaPredicted RBP19.61■□□□□ 0.73
VARS-219ENST00000461328 LDHDQ86WU2 507 aa19.61■□□□□ 0.73
VARS-219ENST00000461328 CCDC85AQ96PX6 553 aaPredicted RBP19.61■□□□□ 0.73
VARS-219ENST00000461328 NSFL1CQ9UNZ2 370 aaKnown RBP19.61■□□□□ 0.73
VARS-219ENST00000461328 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
VARS-219ENST00000461328 KIAA2012Q0VF49 1180 aa19.6■□□□□ 0.73
VARS-219ENST00000461328 DNAAF4Q8WXU2 420 aa19.6■□□□□ 0.73
VARS-219ENST00000461328 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
VARS-219ENST00000461328 ZNRF3Q9ULT6 936 aa19.6■□□□□ 0.73
VARS-219ENST00000461328 COL4A1P02462 1669 aa19.59■□□□□ 0.73
VARS-219ENST00000461328 SLFN5Q08AF3 891 aa19.59■□□□□ 0.73
VARS-219ENST00000461328 CLEC11AQ9Y240 323 aa19.59■□□□□ 0.73
VARS-219ENST00000461328 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
VARS-219ENST00000461328 C6orf229H3BNL8 230 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 CTSWP56202 376 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 GPSM2P81274 684 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 UBE3BQ7Z3V4 1068 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 PNMA8AQ86V59 439 aaPredicted RBP19.58■□□□□ 0.72
VARS-219ENST00000461328 DNAJC5GQ8N7S2 189 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 CDCA7LQ96GN5 454 aa19.58■□□□□ 0.72
VARS-219ENST00000461328 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
VARS-219ENST00000461328 CXCL9Q07325 125 aa19.57■□□□□ 0.72
VARS-219ENST00000461328 F6X3S4 739 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 H7C1W4 665 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 SCNN1DP51172 638 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 GCKRQ14397 625 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 WASHC4Q2M389 1173 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
VARS-219ENST00000461328 RAD17O75943 681 aa19.55■□□□□ 0.72
VARS-219ENST00000461328 CIAPIN1Q6FI81 312 aa19.55■□□□□ 0.72
VARS-219ENST00000461328 CDC5LQ99459 802 aaKnown RBP19.55■□□□□ 0.72
VARS-219ENST00000461328 EYA3Q99504 573 aa19.55■□□□□ 0.72
VARS-219ENST00000461328 ANKIB1Q9P2G1 1089 aa19.55■□□□□ 0.72
VARS-219ENST00000461328 POLLQ9UGP5 575 aa19.55■□□□□ 0.72
VARS-219ENST00000461328 RIMBP2O15034 1052 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 EPS15P42566 896 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 TNIP1Q15025 636 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 TTLL11Q8NHH1 800 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 TBC1D16Q8TBP0 767 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 KLRG1Q96E93 195 aa19.54■□□□□ 0.72
VARS-219ENST00000461328 UFL1O94874 794 aa19.53■□□□□ 0.72
VARS-219ENST00000461328 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
VARS-219ENST00000461328 BCL2L13Q9BXK5 485 aa19.53■□□□□ 0.72
VARS-219ENST00000461328 GREM2Q9H772 168 aa19.53■□□□□ 0.72
VARS-219ENST00000461328 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
VARS-219ENST00000461328 GMPSP49915 693 aaPredicted RBP19.52■□□□□ 0.72
VARS-219ENST00000461328 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.72
VARS-219ENST00000461328 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
VARS-219ENST00000461328 ZC3H12CQ9C0D7 883 aaKnown RBP19.52■□□□□ 0.72
VARS-219ENST00000461328 DBNDD1Q9H9R9 158 aa19.52■□□□□ 0.72
VARS-219ENST00000461328 PODXL2Q9NZ53 605 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms