RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
NEDD9-206ENST00000461055 LMBR1LQ6UX01 489 aa13.45□□□□□ -0.26
NEDD9-206ENST00000461055 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
NEDD9-206ENST00000461055 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 HIP1O00291 1037 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
NEDD9-206ENST00000461055 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
NEDD9-206ENST00000461055 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
NEDD9-206ENST00000461055 SNX21Q969T3 373 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
NEDD9-206ENST00000461055 CHD4Q14839 1912 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 SASH1O94885 1247 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 POLD1P28340 1107 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 CRKLP46109 303 aaKnown RBP13.43□□□□□ -0.26
NEDD9-206ENST00000461055 TJP1Q07157 1748 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 INTS5Q6P9B9 1019 aaKnown RBP13.43□□□□□ -0.26
NEDD9-206ENST00000461055 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 AACSQ86V21 672 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 NLRP10Q86W26 655 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 SLC16A10Q8TF71 515 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 RUFY2Q8WXA3 655 aa13.43□□□□□ -0.26
NEDD9-206ENST00000461055 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
NEDD9-206ENST00000461055 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
NEDD9-206ENST00000461055 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
NEDD9-206ENST00000461055 CSF1RP07333 972 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 MCCP23508 829 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 CHMLP26374 656 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
NEDD9-206ENST00000461055 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
NEDD9-206ENST00000461055 RABEP1Q15276 862 aa13.41□□□□□ -0.26
NEDD9-206ENST00000461055 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
NEDD9-206ENST00000461055 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
NEDD9-206ENST00000461055 EYA2O00167 538 aa13.4□□□□□ -0.26
NEDD9-206ENST00000461055 ANAPC15P60006 121 aa13.4□□□□□ -0.26
NEDD9-206ENST00000461055 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
NEDD9-206ENST00000461055 EAF2Q96CJ1 260 aaPredicted RBP13.4□□□□□ -0.26
NEDD9-206ENST00000461055 AKAP2Q9Y2D5 859 aa13.4□□□□□ -0.26
NEDD9-206ENST00000461055 TUBGCP6Q96RT7 1819 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 PDE8AO60658 829 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 ATP5JP18859 108 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
NEDD9-206ENST00000461055 ITPK1Q13572 414 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 HLFQ16534 295 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 SIL1Q9H173 461 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
NEDD9-206ENST00000461055 CHMP3Q9Y3E7 222 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
NEDD9-206ENST00000461055 RFX7Q2KHR2 1363 aa13.38□□□□□ -0.27
NEDD9-206ENST00000461055 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
NEDD9-206ENST00000461055 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
NEDD9-206ENST00000461055 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
NEDD9-206ENST00000461055 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
NEDD9-206ENST00000461055 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 CTSWP56202 376 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 TFCP2Q12800 502 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
NEDD9-206ENST00000461055 JARID2Q92833 1246 aaPredicted RBP13.37□□□□□ -0.27
NEDD9-206ENST00000461055 FAM89AQ96GI7 184 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
NEDD9-206ENST00000461055 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
NEDD9-206ENST00000461055 ANKRD18BA2A2Z9 1011 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
NEDD9-206ENST00000461055 TSHZ3Q63HK5 1081 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 ATG9AQ7Z3C6 839 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 CCDC8Q9H0W5 538 aaPredicted RBP13.36□□□□□ -0.27
NEDD9-206ENST00000461055 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 RAD50Q92878 1312 aa13.36□□□□□ -0.27
NEDD9-206ENST00000461055 NUP98P52948 1817 aa13.35□□□□□ -0.27
NEDD9-206ENST00000461055 SGSM2O43147 1006 aa13.35□□□□□ -0.27
NEDD9-206ENST00000461055 MCM2P49736 904 aa13.35□□□□□ -0.27
NEDD9-206ENST00000461055 TTLL11Q8NHH1 800 aa13.35□□□□□ -0.27
NEDD9-206ENST00000461055 KLHDC4Q8TBB5 520 aa13.35□□□□□ -0.27
NEDD9-206ENST00000461055 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-206ENST00000461055 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 LY75O60449 1722 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
NEDD9-206ENST00000461055 COL24A1Q17RW2 1714 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 ST18O60284 1047 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 GPTP24298 496 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 KIF2CQ99661 725 aa13.34□□□□□ -0.27
NEDD9-206ENST00000461055 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms