RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 IPO8O15397 1037 aaKnown RBP23.27■■□□□ 1.32
DDR1-241ENST00000460944 RASSF7Q02833 373 aa23.27■■□□□ 1.32
DDR1-241ENST00000460944 CC2D2BQ6DHV5 1058 aa23.27■■□□□ 1.32
DDR1-241ENST00000460944 TAOK3Q9H2K8 898 aa23.27■■□□□ 1.32
DDR1-241ENST00000460944 TAF1P21675 1872 aa23.27■■□□□ 1.32
DDR1-241ENST00000460944 CCDC88AQ3V6T2 1871 aa23.26■■□□□ 1.31
DDR1-241ENST00000460944 GRM8O00222 908 aa23.26■■□□□ 1.31
DDR1-241ENST00000460944 BBOX1O75936 387 aa23.26■■□□□ 1.31
DDR1-241ENST00000460944 CTSWP56202 376 aa23.26■■□□□ 1.31
DDR1-241ENST00000460944 RTKN2Q8IZC4 609 aa23.26■■□□□ 1.31
DDR1-241ENST00000460944 NFKBIEO00221 500 aa23.25■■□□□ 1.31
DDR1-241ENST00000460944 BCAR3O75815 825 aa23.25■■□□□ 1.31
DDR1-241ENST00000460944 TMC4Q7Z404 712 aa23.25■■□□□ 1.31
DDR1-241ENST00000460944 ARHGAP45Q92619 1136 aa23.25■■□□□ 1.31
DDR1-241ENST00000460944 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
DDR1-241ENST00000460944 CCT4P50991 539 aaKnown RBP23.24■■□□□ 1.31
DDR1-241ENST00000460944 CASP7P55210 303 aa23.24■■□□□ 1.31
DDR1-241ENST00000460944 GRIPAP1Q4V328 841 aa23.24■■□□□ 1.31
DDR1-241ENST00000460944 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
DDR1-241ENST00000460944 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
DDR1-241ENST00000460944 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
DDR1-241ENST00000460944 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
DDR1-241ENST00000460944 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
DDR1-241ENST00000460944 LMNB1P20700 586 aa23.23■■□□□ 1.31
DDR1-241ENST00000460944 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
DDR1-241ENST00000460944 RNF181Q9P0P0 153 aa23.23■■□□□ 1.31
DDR1-241ENST00000460944 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
DDR1-241ENST00000460944 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
DDR1-241ENST00000460944 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
DDR1-241ENST00000460944 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
DDR1-241ENST00000460944 DICER1Q9UPY3 1922 aaKnown RBP23.2■■□□□ 1.3
DDR1-241ENST00000460944 RPS8P62241 208 aaKnown RBP23.2■■□□□ 1.3
DDR1-241ENST00000460944 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
DDR1-241ENST00000460944 ATF7IPQ6VMQ6 1270 aa23.2■■□□□ 1.3
DDR1-241ENST00000460944 SP8Q8IXZ3 490 aa23.2■■□□□ 1.3
DDR1-241ENST00000460944 CDC5LQ99459 802 aaKnown RBP23.2■■□□□ 1.3
DDR1-241ENST00000460944 SEC31BQ9NQW1 1179 aa23.2■■□□□ 1.3
DDR1-241ENST00000460944 RTL9Q8NET4 1388 aa23.19■■□□□ 1.3
DDR1-241ENST00000460944 ANKRD18AQ8IVF6 992 aa23.19■■□□□ 1.3
DDR1-241ENST00000460944 GREM2Q9H772 168 aa23.19■■□□□ 1.3
DDR1-241ENST00000460944 LRRC37AA6NMS7 1700 aa23.19■■□□□ 1.3
DDR1-241ENST00000460944 UTYO14607 1347 aa23.18■■□□□ 1.3
DDR1-241ENST00000460944 PSMD1Q99460 953 aa23.18■■□□□ 1.3
DDR1-241ENST00000460944 SNED1Q8TER0 1413 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 CSF1RP07333 972 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 NBPF7P0C2Y1 421 aaPredicted RBP23.17■■□□□ 1.3
DDR1-241ENST00000460944 TRIM27P14373 513 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 CHMP3Q9Y3E7 222 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 SPEF2Q9C093 1822 aa23.17■■□□□ 1.3
DDR1-241ENST00000460944 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
DDR1-241ENST00000460944 FAM161AQ3B820 660 aa23.16■■□□□ 1.3
DDR1-241ENST00000460944 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
DDR1-241ENST00000460944 MPNDQ8N594 471 aa23.16■■□□□ 1.3
DDR1-241ENST00000460944 COL4A1P02462 1669 aa23.16■■□□□ 1.3
DDR1-241ENST00000460944 ITGA6P23229 1130 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 IGHMBP2P38935 993 aaKnown RBP23.15■■□□□ 1.3
DDR1-241ENST00000460944 PRELPP51888 382 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 FOXO4P98177 505 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 SUCLG2Q96I99 432 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
DDR1-241ENST00000460944 ZNF277Q9NRM2 450 aaPredicted RBP23.15■■□□□ 1.3
DDR1-241ENST00000460944 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
DDR1-241ENST00000460944 INTS3Q68E01 1043 aaKnown RBP23.14■■□□□ 1.29
DDR1-241ENST00000460944 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.29
DDR1-241ENST00000460944 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
DDR1-241ENST00000460944 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.29
DDR1-241ENST00000460944 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
DDR1-241ENST00000460944 IARSP41252 1262 aaKnown RBP23.13■■□□□ 1.29
DDR1-241ENST00000460944 IFIT5Q13325 482 aaKnown RBP23.13■■□□□ 1.29
DDR1-241ENST00000460944 EPHA10Q5JZY3 1008 aa23.13■■□□□ 1.29
DDR1-241ENST00000460944 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
DDR1-241ENST00000460944 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
DDR1-241ENST00000460944 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
DDR1-241ENST00000460944 CCDC57Q2TAC2 916 aa23.12■■□□□ 1.29
DDR1-241ENST00000460944 NSFL1CQ9UNZ2 370 aaKnown RBP23.12■■□□□ 1.29
DDR1-241ENST00000460944 TAF7LQ5H9L4 462 aa23.11■■□□□ 1.29
DDR1-241ENST00000460944 MPHOSPH8Q99549 860 aa23.11■■□□□ 1.29
DDR1-241ENST00000460944 RTFDC1Q9BY42 306 aaPredicted RBP23.11■■□□□ 1.29
DDR1-241ENST00000460944 BSDC1Q9NW68 430 aaPredicted RBP23.11■■□□□ 1.29
DDR1-241ENST00000460944 TNNQ9UQP3 1299 aa23.11■■□□□ 1.29
DDR1-241ENST00000460944 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
DDR1-241ENST00000460944 VPS33BQ9H267 617 aa23.1■■□□□ 1.29
DDR1-241ENST00000460944 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
DDR1-241ENST00000460944 ANKIB1Q9P2G1 1089 aa23.1■■□□□ 1.29
DDR1-241ENST00000460944 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
DDR1-241ENST00000460944 GPSM2P81274 684 aa23.09■■□□□ 1.29
DDR1-241ENST00000460944 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
DDR1-241ENST00000460944 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
DDR1-241ENST00000460944 ZNF526Q8TF50 670 aaPredicted RBP23.09■■□□□ 1.29
DDR1-241ENST00000460944 JDP2Q8WYK2 163 aa23.09■■□□□ 1.29
DDR1-241ENST00000460944 GNAI3P08754 354 aa23.08■■□□□ 1.29
DDR1-241ENST00000460944 MS4A1P11836 297 aa23.08■■□□□ 1.29
DDR1-241ENST00000460944 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.29
DDR1-241ENST00000460944 GPBP1L1Q9HC44 474 aaPredicted RBP23.08■■□□□ 1.29
DDR1-241ENST00000460944 DUOX1Q9NRD9 1551 aa23.07■■□□□ 1.28
DDR1-241ENST00000460944 C6orf229H3BNL8 230 aa23.07■■□□□ 1.28
DDR1-241ENST00000460944 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms