RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 UTYO14607 1347 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
HDLBP-229ENST00000460826 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
HDLBP-229ENST00000460826 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
HDLBP-229ENST00000460826 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
HDLBP-229ENST00000460826 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
HDLBP-229ENST00000460826 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
HDLBP-229ENST00000460826 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-229ENST00000460826 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
HDLBP-229ENST00000460826 CTSWP56202 376 aa17.67■□□□□ 0.42
HDLBP-229ENST00000460826 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
HDLBP-229ENST00000460826 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
HDLBP-229ENST00000460826 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
HDLBP-229ENST00000460826 ALDH1B1P30837 517 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 FOXO4P98177 505 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
HDLBP-229ENST00000460826 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
HDLBP-229ENST00000460826 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 SEC31BQ9NQW1 1179 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 FER1L6Q2WGJ9 1857 aa17.66■□□□□ 0.42
HDLBP-229ENST00000460826 C21orf2O43822 256 aa17.65■□□□□ 0.42
HDLBP-229ENST00000460826 C7orf43Q8WVR3 580 aa17.65■□□□□ 0.42
HDLBP-229ENST00000460826 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
HDLBP-229ENST00000460826 MEIS3Q99687 375 aa17.65■□□□□ 0.42
HDLBP-229ENST00000460826 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
HDLBP-229ENST00000460826 CHD4Q14839 1912 aa17.64■□□□□ 0.42
HDLBP-229ENST00000460826 CSF1RP07333 972 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 GRAPQ13588 217 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
HDLBP-229ENST00000460826 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-229ENST00000460826 GREM2Q9H772 168 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 SBF1O95248 1867 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
HDLBP-229ENST00000460826 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
HDLBP-229ENST00000460826 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
HDLBP-229ENST00000460826 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
HDLBP-229ENST00000460826 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
HDLBP-229ENST00000460826 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
HDLBP-229ENST00000460826 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-229ENST00000460826 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
HDLBP-229ENST00000460826 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
HDLBP-229ENST00000460826 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
HDLBP-229ENST00000460826 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
HDLBP-229ENST00000460826 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-229ENST00000460826 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
HDLBP-229ENST00000460826 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
HDLBP-229ENST00000460826 BBOX1O75936 387 aa17.6■□□□□ 0.41
HDLBP-229ENST00000460826 ITGA6P23229 1130 aa17.6■□□□□ 0.41
HDLBP-229ENST00000460826 RPS8P62241 208 aaKnown RBP17.6■□□□□ 0.41
HDLBP-229ENST00000460826 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-229ENST00000460826 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
HDLBP-229ENST00000460826 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
HDLBP-229ENST00000460826 NFKBIEO00221 500 aa17.59■□□□□ 0.41
HDLBP-229ENST00000460826 RRP1P56182 461 aaKnown RBP17.59■□□□□ 0.41
HDLBP-229ENST00000460826 RASSF7Q02833 373 aa17.59■□□□□ 0.41
HDLBP-229ENST00000460826 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-229ENST00000460826 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
HDLBP-229ENST00000460826 A0A1B0GUL6 1792 aa17.58■□□□□ 0.41
HDLBP-229ENST00000460826 GNAI3P08754 354 aa17.58■□□□□ 0.4
HDLBP-229ENST00000460826 MS4A1P11836 297 aa17.58■□□□□ 0.4
HDLBP-229ENST00000460826 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
HDLBP-229ENST00000460826 COG6Q9Y2V7 657 aa17.58■□□□□ 0.4
HDLBP-229ENST00000460826 LTBP1Q14766 1721 aa17.58■□□□□ 0.4
HDLBP-229ENST00000460826 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
HDLBP-229ENST00000460826 ZBTB7BO15156 539 aaPredicted RBP17.57■□□□□ 0.4
HDLBP-229ENST00000460826 PRELPP51888 382 aa17.57■□□□□ 0.4
HDLBP-229ENST00000460826 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
HDLBP-229ENST00000460826 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
HDLBP-229ENST00000460826 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
HDLBP-229ENST00000460826 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
HDLBP-229ENST00000460826 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
HDLBP-229ENST00000460826 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
HDLBP-229ENST00000460826 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
HDLBP-229ENST00000460826 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
HDLBP-229ENST00000460826 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
HDLBP-229ENST00000460826 DUOX1Q9NRD9 1551 aa17.56■□□□□ 0.4
HDLBP-229ENST00000460826 CC2D2BQ6DHV5 1058 aa17.55■□□□□ 0.4
HDLBP-229ENST00000460826 TMC4Q7Z404 712 aa17.55■□□□□ 0.4
HDLBP-229ENST00000460826 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
HDLBP-229ENST00000460826 GNAI2P04899 355 aa17.54■□□□□ 0.4
HDLBP-229ENST00000460826 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
HDLBP-229ENST00000460826 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
HDLBP-229ENST00000460826 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
HDLBP-229ENST00000460826 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
HDLBP-229ENST00000460826 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-229ENST00000460826 GPSM2P81274 684 aa17.53■□□□□ 0.4
HDLBP-229ENST00000460826 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDLBP-229ENST00000460826 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
HDLBP-229ENST00000460826 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
HDLBP-229ENST00000460826 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-229ENST00000460826 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.4
HDLBP-229ENST00000460826 MPNDQ8N594 471 aa17.52■□□□□ 0.4
HDLBP-229ENST00000460826 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
HDLBP-229ENST00000460826 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.4
HDLBP-229ENST00000460826 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.4
HDLBP-229ENST00000460826 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
HDLBP-229ENST00000460826 HDAC5Q9UQL6 1122 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms