RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	SF3B3	Q15393	1217 aa	Known RBP	12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	CCDC27	Q2M243	656 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	CCDC30	Q5VVM6	783 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	MAP1S	Q66K74	1059 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	TMC4	Q7Z404	712 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	TSPYL6	Q8N831	410 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	CELF1	Q92879	486 aa	Known RBP	12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	MYD88	Q99836	296 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	VPS33B	Q9H267	617 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	PCNT	O95613	3336 aa		12.06	□□□□□ -0.48
PSMD2-209	ENST00000460628	ANP32C	O43423	234 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	ITGBL1	O95965	494 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	KIAA2012	Q0VF49	1180 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	WWC1	Q8IX03	1113 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	CHMP4A	Q9BY43	222 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	MKRN1	Q9UHC7	482 aa	Known RBP	12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	ZNRF3	Q9ULT6	936 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	ANKRD36C	Q5JPF3	1778 aa		12.05	□□□□□ -0.48
PSMD2-209	ENST00000460628	CCDC88A	Q3V6T2	1871 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	DDX58	O95786	925 aa	Known RBP	12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	EPS15	P42566	896 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	CXCL9	Q07325	125 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	CNTROB	Q8N137	903 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	DUOX1	Q9NRD9	1551 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	CNTNAP1	P78357	1384 aa		12.04	□□□□□ -0.48
PSMD2-209	ENST00000460628	TMEM88B	A6NKF7	163 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	HSPA1A	P0DMV8	641 aa	Known RBP	12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	HSPA1B	P0DMV9	641 aa	Known RBP	12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	GMPS	P49915	693 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	CIAPIN1	Q6FI81	312 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	CCDC191	Q8NCU4	936 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	METTL22	Q9BUU2	404 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	CWC25	Q9NXE8	425 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	GPRC5D	Q9NZD1	345 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	MAP3K2	Q9Y2U5	619 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	IL16	Q14005	1332 aa		12.03	□□□□□ -0.48
PSMD2-209	ENST00000460628	ADAMTSL1	Q8N6G6	1762 aa		12.02	□□□□□ -0.48
PSMD2-209	ENST00000460628	SCN4A	P35499	1836 aa		12.02	□□□□□ -0.48
PSMD2-209	ENST00000460628	RAD17	O75943	681 aa		12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	PCCA	P05165	728 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	HSP90B1	P14625	803 aa	Known RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	TWISTNB	Q3B726	338 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	USP50	Q70EL3	339 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	STK31	Q9BXU1	1019 aa		12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	ADARB2	Q9NS39	739 aa	Known RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	LTBP1	Q14766	1721 aa		12.02	□□□□□ -0.49
PSMD2-209	ENST00000460628	COL4A1	P02462	1669 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	YDJC	A8MPS7	323 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	RPS8	P62241	208 aa	Known RBP	12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	GPSM2	P81274	684 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	CCDC152	Q4G0S7	254 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	NCBP3	Q53F19	620 aa	Known RBP	12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	JARID2	Q92833	1246 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	SEC31B	Q9NQW1	1179 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	CDHR2	Q9BYE9	1310 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	FANCI	Q9NVI1	1328 aa		12.01	□□□□□ -0.49
PSMD2-209	ENST00000460628	PI4KAP2	A4QPH2	592 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	C6orf229	H3BNL8	230 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	PDE8A	O60658	829 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	IGKV5-2	P06315	115 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	TNIP1	Q15025	636 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	WASHC4	Q2M389	1173 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	COL13A1	Q5TAT6	717 aa	Predicted RBP	12	□□□□□ -0.49
PSMD2-209	ENST00000460628	KSR2	Q6VAB6	950 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	PI4KAP1	Q8N8J0	262 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	GPR101	Q96P66	508 aa	Predicted RBP	12	□□□□□ -0.49
PSMD2-209	ENST00000460628	CCDC85A	Q96PX6	553 aa	Predicted RBP	12	□□□□□ -0.49
PSMD2-209	ENST00000460628	BCL2L13	Q9BXK5	485 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	DBNDD1	Q9H9R9	158 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	POLL	Q9UGP5	575 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	LRRC37A	A6NMS7	1700 aa		12	□□□□□ -0.49
PSMD2-209	ENST00000460628	DDX60	Q8IY21	1712 aa	Known RBP	12	□□□□□ -0.49
PSMD2-209	ENST00000460628	RASSF10	A6NK89	507 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	TRAF5	O00463	557 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	RIMBP2	O15034	1052 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	CTSW	P56202	376 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	NEXN	Q0ZGT2	675 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	G2E3	Q7L622	706 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	TBC1D16	Q8TBP0	767 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	SALL2	Q9Y467	1007 aa	Predicted RBP	11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	LAMB2	P55268	1798 aa		11.99	□□□□□ -0.49
PSMD2-209	ENST00000460628	SHTN1	A0MZ66	631 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	UFL1	O94874	794 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	VEGFB	P49765	207 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	FMR1	Q06787	632 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	5e-7	■■■□□ 17.3
PSMD2-209	ENST00000460628	CWF19L2	Q2TBE0	894 aa	Known RBP	11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	TRPM4	Q8TD43	1214 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	EYA3	Q99504	573 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	PODXL2	Q9NZ53	605 aa		11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	ABT1	Q9ULW3	272 aa	Known RBP	11.98	□□□□□ -0.49
PSMD2-209	ENST00000460628	NEURL1B	A8MQ27	555 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	PSMD14	O00487	310 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	ECE2	O60344	883 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	SLC4A2	P04920	1241 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	FLII	Q13045	1269 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	DOK7	Q18PE1	504 aa		11.97	□□□□□ -0.49
PSMD2-209	ENST00000460628	WDR63	Q8IWG1	891 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms