RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 ABCC4O15439 1325 aa21■□□□□ 0.95
SMARCD3-204ENST00000460431 PPEF1O14829 653 aaPredicted RBP20.99■□□□□ 0.95
SMARCD3-204ENST00000460431 BBOX1O75936 387 aa20.99■□□□□ 0.95
SMARCD3-204ENST00000460431 CWF19L2Q2TBE0 894 aaKnown RBP20.99■□□□□ 0.95
SMARCD3-204ENST00000460431 SNED1Q8TER0 1413 aa20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 GRIPAP1Q4V328 841 aa20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 SMC1BQ8NDV3 1235 aa20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 JARID2Q92833 1246 aaPredicted RBP20.98■□□□□ 0.95
SMARCD3-204ENST00000460431 F6X3S4 739 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 PDE8AO60658 829 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 GRAPQ13588 217 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 MRPL50Q8N5N7 158 aaKnown RBP20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 GRAPLQ8TC17 118 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 ATP6V0A2Q9Y487 856 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 MYH3P11055 1940 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 TIAM2Q8IVF5 1701 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 CDHR2Q9BYE9 1310 aa20.97■□□□□ 0.95
SMARCD3-204ENST00000460431 H7C1W4 665 aa20.96■□□□□ 0.95
SMARCD3-204ENST00000460431 CT47B1P0C2W7 299 aaPredicted RBP20.96■□□□□ 0.95
SMARCD3-204ENST00000460431 GCKRQ14397 625 aa20.96■□□□□ 0.95
SMARCD3-204ENST00000460431 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
SMARCD3-204ENST00000460431 PSMD1Q99460 953 aa20.96■□□□□ 0.95
SMARCD3-204ENST00000460431 HTRA3P83110 453 aa20.95■□□□□ 0.94
SMARCD3-204ENST00000460431 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMARCD3-204ENST00000460431 SP8Q8IXZ3 490 aa20.95■□□□□ 0.94
SMARCD3-204ENST00000460431 ALDH1L2Q3SY69 923 aa20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 BEND3Q5T5X7 828 aa20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 SLC51AQ86UW1 340 aa20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 TMX4Q9H1E5 349 aaPredicted RBP20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 ZNF277Q9NRM2 450 aaPredicted RBP20.94■□□□□ 0.94
SMARCD3-204ENST00000460431 DDNO94850 711 aaPredicted RBP20.93■□□□□ 0.94
SMARCD3-204ENST00000460431 CELF1Q92879 486 aaKnown RBP20.93■□□□□ 0.94
SMARCD3-204ENST00000460431 WDR90Q96KV7 1748 aa20.92■□□□□ 0.94
SMARCD3-204ENST00000460431 CASP7P55210 303 aa20.92■□□□□ 0.94
SMARCD3-204ENST00000460431 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
SMARCD3-204ENST00000460431 UBE3BQ7Z3V4 1068 aa20.92■□□□□ 0.94
SMARCD3-204ENST00000460431 PTPRCP08575 1304 aa20.91■□□□□ 0.94
SMARCD3-204ENST00000460431 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-204ENST00000460431 RPS8P62241 208 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-204ENST00000460431 CTSWP56202 376 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 TTLL11Q8NHH1 800 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 KLRG1Q96E93 195 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 PLA2G12BQ9BX93 195 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 SEC31BQ9NQW1 1179 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 LRRC37AA6NMS7 1700 aa20.9■□□□□ 0.94
SMARCD3-204ENST00000460431 COL4A1P02462 1669 aa20.89■□□□□ 0.94
SMARCD3-204ENST00000460431 ALDH1L1O75891 902 aa20.89■□□□□ 0.93
SMARCD3-204ENST00000460431 SLC4A10Q6U841 1118 aa20.89■□□□□ 0.93
SMARCD3-204ENST00000460431 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
SMARCD3-204ENST00000460431 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
SMARCD3-204ENST00000460431 MPNDQ8N594 471 aa20.88■□□□□ 0.93
SMARCD3-204ENST00000460431 SRCIN1Q9C0H9 1055 aa20.88■□□□□ 0.93
SMARCD3-204ENST00000460431 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
SMARCD3-204ENST00000460431 DPP8Q6V1X1 898 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-204ENST00000460431 L3MBTL3Q96JM7 780 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-204ENST00000460431 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-204ENST00000460431 VPS33BQ9H267 617 aa20.87■□□□□ 0.93
SMARCD3-204ENST00000460431 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
SMARCD3-204ENST00000460431 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 ZNF541Q9H0D2 1346 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 FZD9O00144 591 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 GRM8O00222 908 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 CSF1RP07333 972 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 POTEIP0CG38 1075 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 POTEJP0CG39 1038 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 GREM2Q9H772 168 aa20.85■□□□□ 0.93
SMARCD3-204ENST00000460431 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
SMARCD3-204ENST00000460431 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
SMARCD3-204ENST00000460431 LARGE2Q8N3Y3 721 aa20.84■□□□□ 0.93
SMARCD3-204ENST00000460431 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
SMARCD3-204ENST00000460431 C9orf78Q9NZ63 289 aaPredicted RBP20.84■□□□□ 0.93
SMARCD3-204ENST00000460431 COL4A5P29400 1685 aa20.83■□□□□ 0.93
SMARCD3-204ENST00000460431 IQCA1LA6NCM1 817 aa20.83■□□□□ 0.93
SMARCD3-204ENST00000460431 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
SMARCD3-204ENST00000460431 TAF1DQ9H5J8 278 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-204ENST00000460431 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.93
SMARCD3-204ENST00000460431 PPIP5K2O43314 1243 aa20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 GPSM2P81274 684 aa20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 FOXO4P98177 505 aa20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 AOC3Q16853 763 aa20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 IFFO2Q5TF58 517 aa20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 NOB1Q9ULX3 412 aaKnown RBP20.82■□□□□ 0.92
SMARCD3-204ENST00000460431 LTBP1Q14766 1721 aa20.81■□□□□ 0.92
SMARCD3-204ENST00000460431 DUOX1Q9NRD9 1551 aa20.81■□□□□ 0.92
SMARCD3-204ENST00000460431 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
SMARCD3-204ENST00000460431 KIAA2012Q0VF49 1180 aa20.81■□□□□ 0.92
SMARCD3-204ENST00000460431 PODXL2Q9NZ53 605 aa20.81■□□□□ 0.92
SMARCD3-204ENST00000460431 UTYO14607 1347 aa20.8■□□□□ 0.92
SMARCD3-204ENST00000460431 ITGA6P23229 1130 aa20.8■□□□□ 0.92
SMARCD3-204ENST00000460431 BSDC1Q9NW68 430 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-204ENST00000460431 POLLQ9UGP5 575 aa20.8■□□□□ 0.92
SMARCD3-204ENST00000460431 NBPF7P0C2Y1 421 aaPredicted RBP20.79■□□□□ 0.92
SMARCD3-204ENST00000460431 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms