RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 SURF6O75683 361 aaKnown RBP12.2□□□□□ -0.46
TNC-204ENST00000460345 CSF1RP07333 972 aa12.2□□□□□ -0.46
TNC-204ENST00000460345 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
TNC-204ENST00000460345 GCC1Q96CN9 775 aa12.2□□□□□ -0.46
TNC-204ENST00000460345 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
TNC-204ENST00000460345 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
TNC-204ENST00000460345 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 APBB1O00213 710 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
TNC-204ENST00000460345 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
TNC-204ENST00000460345 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 GREM2Q9H772 168 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
TNC-204ENST00000460345 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
TNC-204ENST00000460345 ITGA6P23229 1130 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
TNC-204ENST00000460345 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNC-204ENST00000460345 ANKRD45Q5TZF3 282 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 SIL1Q9H173 461 aa12.18□□□□□ -0.46
TNC-204ENST00000460345 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
TNC-204ENST00000460345 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
TNC-204ENST00000460345 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
TNC-204ENST00000460345 HSP90AB4PQ58FF6 505 aa12.17□□□□□ -0.46
TNC-204ENST00000460345 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
TNC-204ENST00000460345 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
TNC-204ENST00000460345 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
TNC-204ENST00000460345 RAB11FIP3O75154 756 aa12.16□□□□□ -0.46
TNC-204ENST00000460345 POLD1P28340 1107 aa12.16□□□□□ -0.46
TNC-204ENST00000460345 PTPN12Q05209 780 aaKnown RBP12.16□□□□□ -0.46
TNC-204ENST00000460345 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
TNC-204ENST00000460345 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
TNC-204ENST00000460345 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
TNC-204ENST00000460345 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
TNC-204ENST00000460345 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
TNC-204ENST00000460345 DDX60Q8IY21 1712 aaKnown RBP12.16□□□□□ -0.46
TNC-204ENST00000460345 MYH3P11055 1940 aa12.15□□□□□ -0.46
TNC-204ENST00000460345 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
TNC-204ENST00000460345 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
TNC-204ENST00000460345 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
TNC-204ENST00000460345 RPGRQ92834 1020 aaKnown RBP12.15□□□□□ -0.46
TNC-204ENST00000460345 EYA2O00167 538 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
TNC-204ENST00000460345 PDE6BP35913 854 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 NUCB1Q02818 461 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
TNC-204ENST00000460345 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 LNPKQ9C0E8 428 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 LAMB2P55268 1798 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
TNC-204ENST00000460345 RIC1Q4ADV7 1423 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
TNC-204ENST00000460345 LRRC24Q50LG9 513 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 RHPN1Q8TCX5 695 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
TNC-204ENST00000460345 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
TNC-204ENST00000460345 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
TNC-204ENST00000460345 CIAO1O76071 339 aa12.12□□□□□ -0.47
TNC-204ENST00000460345 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
TNC-204ENST00000460345 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
TNC-204ENST00000460345 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
TNC-204ENST00000460345 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 TNRC6CQ9HCJ0 1690 aaKnown RBP12.11□□□□□ -0.47
TNC-204ENST00000460345 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
TNC-204ENST00000460345 H0YIN7 160 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 SASH1O94885 1247 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 RGS3P49796 1198 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
TNC-204ENST00000460345 TFCP2Q12800 502 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 GRAPQ13588 217 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
TNC-204ENST00000460345 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNC-204ENST00000460345 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
TNC-204ENST00000460345 NPR1P16066 1061 aa12.1□□□□□ -0.47
TNC-204ENST00000460345 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
TNC-204ENST00000460345 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
TNC-204ENST00000460345 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
TNC-204ENST00000460345 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
TNC-204ENST00000460345 RIPOR2Q9Y4F9 1068 aa12.1□□□□□ -0.47
TNC-204ENST00000460345 SRGNP10124 158 aa12.09□□□□□ -0.47
TNC-204ENST00000460345 CHRNA5P30532 468 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms