RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 CAPNS2Q96L46 248 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 VPS33BQ9H267 617 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 ADARB2Q9NS39 739 aaKnown RBP28.4■■■□□ 2.14
PDE6B-203ENST00000460119 CHPF2Q9P2E5 772 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 TRIM35Q9UPQ4 493 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 DDX10Q13206 875 aaKnown RBP28.39■■■□□ 2.14
PDE6B-203ENST00000460119 SH3TC1Q8TE82 1336 aa28.39■■■□□ 2.13
PDE6B-203ENST00000460119 SHTN1A0MZ66 631 aa28.38■■■□□ 2.13
PDE6B-203ENST00000460119 MAP2K1Q02750 393 aaPredicted RBP28.38■■■□□ 2.13
PDE6B-203ENST00000460119 GRAPQ13588 217 aa28.38■■■□□ 2.13
PDE6B-203ENST00000460119 CIAPIN1Q6FI81 312 aa28.38■■■□□ 2.13
PDE6B-203ENST00000460119 GRAPLQ8TC17 118 aaPredicted RBP28.38■■■□□ 2.13
PDE6B-203ENST00000460119 HIRAP54198 1017 aaPredicted RBP28.37■■■□□ 2.13
PDE6B-203ENST00000460119 KIAA2012Q0VF49 1180 aa28.37■■■□□ 2.13
PDE6B-203ENST00000460119 GLIS2Q9BZE0 524 aaPredicted RBP28.37■■■□□ 2.13
PDE6B-203ENST00000460119 ATP5J2-PTCD1G3V325 749 aa28.36■■■□□ 2.13
PDE6B-203ENST00000460119 GPR101Q96P66 508 aaPredicted RBP28.36■■■□□ 2.13
PDE6B-203ENST00000460119 BCL2L13Q9BXK5 485 aa28.36■■■□□ 2.13
PDE6B-203ENST00000460119 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
PDE6B-203ENST00000460119 YDJCA8MPS7 323 aa28.34■■■□□ 2.13
PDE6B-203ENST00000460119 AOC2O75106 756 aa28.34■■■□□ 2.13
PDE6B-203ENST00000460119 RTL5Q5HYW3 569 aaPredicted RBP28.34■■■□□ 2.13
PDE6B-203ENST00000460119 TRPM4Q8TD43 1214 aa28.34■■■□□ 2.13
PDE6B-203ENST00000460119 TLL2Q9Y6L7 1015 aa28.34■■■□□ 2.13
PDE6B-203ENST00000460119 CELF2O95319 508 aaKnown RBP28.33■■■□□ 2.13
PDE6B-203ENST00000460119 HDGFL1Q5TGJ6 251 aa28.33■■■□□ 2.13
PDE6B-203ENST00000460119 CELF1Q92879 486 aaKnown RBP28.33■■■□□ 2.13
PDE6B-203ENST00000460119 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
PDE6B-203ENST00000460119 ECE1P42892 770 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 DLK2Q6UY11 383 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 ANKRD13DQ6ZTN6 518 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 PLBD2Q8NHP8 589 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 CNOT7Q9UIV1 285 aaKnown RBP28.32■■■□□ 2.12
PDE6B-203ENST00000460119 TSKSQ9UJT2 592 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 ADAMTS8Q9UP79 889 aa28.32■■■□□ 2.12
PDE6B-203ENST00000460119 ZBTB12Q9Y330 459 aaPredicted RBP28.32■■■□□ 2.12
PDE6B-203ENST00000460119 TNIP1Q15025 636 aa28.31■■■□□ 2.12
PDE6B-203ENST00000460119 ISCA1Q9BUE6 129 aa28.31■■■□□ 2.12
PDE6B-203ENST00000460119 PGAP2Q9UHJ9 254 aa28.31■■■□□ 2.12
PDE6B-203ENST00000460119 MYBBP1AQ9BQG0 1328 aaKnown RBP28.3■■■□□ 2.12
PDE6B-203ENST00000460119 RIMBP2O15034 1052 aa28.3■■■□□ 2.12
PDE6B-203ENST00000460119 ZNF408Q9H9D4 720 aa28.3■■■□□ 2.12
PDE6B-203ENST00000460119 NSFL1CQ9UNZ2 370 aaKnown RBP28.3■■■□□ 2.12
PDE6B-203ENST00000460119 WDR43Q15061 677 aaKnown RBP eCLIP28.28■■■□□ 2.12
PDE6B-203ENST00000460119 DUSP27Q5VZP5 1158 aa28.28■■■□□ 2.12
PDE6B-203ENST00000460119 SAPCD2Q86UD0 394 aa28.28■■■□□ 2.12
PDE6B-203ENST00000460119 ABHD8Q96I13 439 aa28.28■■■□□ 2.12
PDE6B-203ENST00000460119 KCNQ5Q9NR82 932 aa28.28■■■□□ 2.12
PDE6B-203ENST00000460119 GPSM2P81274 684 aa28.27■■■□□ 2.12
PDE6B-203ENST00000460119 SF3B3Q15393 1217 aaKnown RBP28.27■■■□□ 2.12
PDE6B-203ENST00000460119 WASHC4Q2M389 1173 aa28.27■■■□□ 2.12
PDE6B-203ENST00000460119 USP48Q86UV5 1035 aa28.27■■■□□ 2.12
PDE6B-203ENST00000460119 DBNDD1Q9H9R9 158 aa28.27■■■□□ 2.12
PDE6B-203ENST00000460119 DBF4Q9UBU7 674 aaPredicted RBP28.27■■■□□ 2.12
PDE6B-203ENST00000460119 DOK7Q18PE1 504 aa28.26■■■□□ 2.11
PDE6B-203ENST00000460119 SAMD7Q7Z3H4 446 aa28.26■■■□□ 2.11
PDE6B-203ENST00000460119 MICALL2Q8IY33 904 aa28.26■■■□□ 2.11
PDE6B-203ENST00000460119 BEGAINQ9BUH8 593 aa28.26■■■□□ 2.11
PDE6B-203ENST00000460119 POLLQ9UGP5 575 aa28.26■■■□□ 2.11
PDE6B-203ENST00000460119 C6orf229H3BNL8 230 aa28.25■■■□□ 2.11
PDE6B-203ENST00000460119 H7C1D1 291 aa28.25■■■□□ 2.11
PDE6B-203ENST00000460119 PSMD14O00487 310 aa28.24■■■□□ 2.11
PDE6B-203ENST00000460119 CDC37L1Q7L3B6 337 aa28.24■■■□□ 2.11
PDE6B-203ENST00000460119 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
PDE6B-203ENST00000460119 MBIPQ9NS73 344 aa28.24■■■□□ 2.11
PDE6B-203ENST00000460119 ELL2O00472 640 aaPredicted RBP28.23■■■□□ 2.11
PDE6B-203ENST00000460119 IRS4O14654 1257 aaPredicted RBP28.23■■■□□ 2.11
PDE6B-203ENST00000460119 EGFRP00533 1210 aa28.23■■■□□ 2.11
PDE6B-203ENST00000460119 RBM26Q5T8P6 1007 aaKnown RBP28.23■■■□□ 2.11
PDE6B-203ENST00000460119 ZC3H15Q8WU90 426 aaKnown RBP28.23■■■□□ 2.11
PDE6B-203ENST00000460119 JARID2Q92833 1246 aaPredicted RBP28.23■■■□□ 2.11
PDE6B-203ENST00000460119 CFAP44Q96MT7 982 aa28.23■■■□□ 2.11
PDE6B-203ENST00000460119 HYPKQ9NX55 129 aa28.23■■■□□ 2.11
PDE6B-203ENST00000460119 HOXB7P09629 217 aa28.22■■■□□ 2.11
PDE6B-203ENST00000460119 MAP2K2P36507 400 aa28.22■■■□□ 2.11
PDE6B-203ENST00000460119 TBC1D10BQ4KMP7 808 aaPredicted RBP28.22■■■□□ 2.11
PDE6B-203ENST00000460119 ZIC5Q96T25 663 aa28.22■■■□□ 2.11
PDE6B-203ENST00000460119 PHAXQ9H814 394 aaKnown RBP28.22■■■□□ 2.11
PDE6B-203ENST00000460119 SEC31BQ9NQW1 1179 aa28.21■■■□□ 2.11
PDE6B-203ENST00000460119 CDHR2Q9BYE9 1310 aa28.2■■■□□ 2.11
PDE6B-203ENST00000460119 RPS8P62241 208 aaKnown RBP28.2■■■□□ 2.1
PDE6B-203ENST00000460119 TRIM28Q13263 835 aaKnown RBP28.2■■■□□ 2.1
PDE6B-203ENST00000460119 RIC3Q7Z5B4 369 aa28.2■■■□□ 2.1
PDE6B-203ENST00000460119 DUOX1Q9NRD9 1551 aa28.19■■■□□ 2.1
PDE6B-203ENST00000460119 ECE2O60344 883 aa28.18■■■□□ 2.1
PDE6B-203ENST00000460119 TBC1D16Q8TBP0 767 aa28.18■■■□□ 2.1
PDE6B-203ENST00000460119 DPF2Q92785 391 aa28.18■■■□□ 2.1
PDE6B-203ENST00000460119 COL4A1P02462 1669 aa28.18■■■□□ 2.1
PDE6B-203ENST00000460119 TAF1P21675 1872 aa28.18■■■□□ 2.1
PDE6B-203ENST00000460119 ZNF853P0CG23 659 aa28.17■■■□□ 2.1
PDE6B-203ENST00000460119 LAMB2P55268 1798 aa28.16■■■□□ 2.1
PDE6B-203ENST00000460119 RTL9Q8NET4 1388 aa28.16■■■□□ 2.1
PDE6B-203ENST00000460119 APAF1O14727 1248 aa28.16■■■□□ 2.1
PDE6B-203ENST00000460119 CCDC85AQ96PX6 553 aaPredicted RBP28.16■■■□□ 2.1
PDE6B-203ENST00000460119 MYD88Q99836 296 aa28.16■■■□□ 2.1
PDE6B-203ENST00000460119 CCDC85CA6NKD9 419 aa28.15■■■□□ 2.1
PDE6B-203ENST00000460119 HHIPL1Q96JK4 782 aa28.15■■■□□ 2.1
PDE6B-203ENST00000460119 ADM5C9JUS6 153 aa28.14■■■□□ 2.1
PDE6B-203ENST00000460119 HUNKP57058 714 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms