RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
SDF4-204ENST00000459994 RIC3Q7Z5B4 369 aa19.97■□□□□ 0.79
SDF4-204ENST00000459994 MYD88Q99836 296 aa19.97■□□□□ 0.79
SDF4-204ENST00000459994 AOC3Q16853 763 aa19.96■□□□□ 0.79
SDF4-204ENST00000459994 G2E3Q7L622 706 aa19.96■□□□□ 0.79
SDF4-204ENST00000459994 TAF1DQ9H5J8 278 aaPredicted RBP19.96■□□□□ 0.79
SDF4-204ENST00000459994 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
SDF4-204ENST00000459994 GRAPQ13588 217 aa19.95■□□□□ 0.78
SDF4-204ENST00000459994 GRAPLQ8TC17 118 aaPredicted RBP19.95■□□□□ 0.78
SDF4-204ENST00000459994 CELF1Q92879 486 aaKnown RBP19.95■□□□□ 0.78
SDF4-204ENST00000459994 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
SDF4-204ENST00000459994 TRIM28Q13263 835 aaKnown RBP19.94■□□□□ 0.78
SDF4-204ENST00000459994 CCDC30Q5VVM6 783 aa19.94■□□□□ 0.78
SDF4-204ENST00000459994 DDX46Q7L014 1031 aaKnown RBP19.94■□□□□ 0.78
SDF4-204ENST00000459994 SP8Q8IXZ3 490 aa19.94■□□□□ 0.78
SDF4-204ENST00000459994 LARGE2Q8N3Y3 721 aa19.94■□□□□ 0.78
SDF4-204ENST00000459994 IRS4O14654 1257 aaPredicted RBP19.93■□□□□ 0.78
SDF4-204ENST00000459994 TWISTNBQ3B726 338 aaPredicted RBP19.93■□□□□ 0.78
SDF4-204ENST00000459994 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 BBOX1O75936 387 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 SF3B3Q15393 1217 aaKnown RBP19.92■□□□□ 0.78
SDF4-204ENST00000459994 CHADLQ6NUI6 762 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 JDP2Q8WYK2 163 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 METTL22Q9BUU2 404 aaPredicted RBP19.92■□□□□ 0.78
SDF4-204ENST00000459994 RTFDC1Q9BY42 306 aaPredicted RBP19.92■□□□□ 0.78
SDF4-204ENST00000459994 MAP3K2Q9Y2U5 619 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 GJA3Q9Y6H8 435 aa19.92■□□□□ 0.78
SDF4-204ENST00000459994 EAPPQ56P03 285 aaPredicted RBP19.91■□□□□ 0.78
SDF4-204ENST00000459994 GPC2Q8N158 579 aa19.91■□□□□ 0.78
SDF4-204ENST00000459994 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
SDF4-204ENST00000459994 KLRG1Q96E93 195 aa19.91■□□□□ 0.78
SDF4-204ENST00000459994 SEC31BQ9NQW1 1179 aa19.91■□□□□ 0.78
SDF4-204ENST00000459994 HACL1Q9UJ83 578 aa19.91■□□□□ 0.78
SDF4-204ENST00000459994 SCN9AQ15858 1988 aa19.91■□□□□ 0.78
SDF4-204ENST00000459994 IQCA1LA6NCM1 817 aa19.9■□□□□ 0.78
SDF4-204ENST00000459994 IGKV5-2P06315 115 aa19.9■□□□□ 0.78
SDF4-204ENST00000459994 EPHX2P34913 555 aa19.9■□□□□ 0.78
SDF4-204ENST00000459994 GRIPAP1Q4V328 841 aa19.9■□□□□ 0.78
SDF4-204ENST00000459994 DPP8Q6V1X1 898 aaPredicted RBP19.9■□□□□ 0.78
SDF4-204ENST00000459994 MPNDQ8N594 471 aa19.9■□□□□ 0.78
SDF4-204ENST00000459994 PI4KAP2A4QPH2 592 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 VAMP4O75379 141 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
SDF4-204ENST00000459994 SCNN1DP51172 638 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
SDF4-204ENST00000459994 NIM1KQ8IY84 436 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 PI4KAP1Q8N8J0 262 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
SDF4-204ENST00000459994 PCCAP05165 728 aaPredicted RBP19.88■□□□□ 0.77
SDF4-204ENST00000459994 EPS15P42566 896 aa19.88■□□□□ 0.77
SDF4-204ENST00000459994 CWF19L2Q2TBE0 894 aaKnown RBP19.88■□□□□ 0.77
SDF4-204ENST00000459994 KSR2Q6VAB6 950 aa19.88■□□□□ 0.77
SDF4-204ENST00000459994 LDHDQ86WU2 507 aa19.88■□□□□ 0.77
SDF4-204ENST00000459994 CCDC191Q8NCU4 936 aa19.88■□□□□ 0.77
SDF4-204ENST00000459994 GPR101Q96P66 508 aaPredicted RBP19.88■□□□□ 0.77
SDF4-204ENST00000459994 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
SDF4-204ENST00000459994 CWC25Q9NXE8 425 aaPredicted RBP19.88■□□□□ 0.77
SDF4-204ENST00000459994 PASKQ96RG2 1323 aa19.87■□□□□ 0.77
SDF4-204ENST00000459994 YDJCA8MPS7 323 aa19.87■□□□□ 0.77
SDF4-204ENST00000459994 SLC4A2P04920 1241 aa19.87■□□□□ 0.77
SDF4-204ENST00000459994 GPSM2P81274 684 aa19.87■□□□□ 0.77
SDF4-204ENST00000459994 TRPM7Q96QT4 1865 aa19.87■□□□□ 0.77
SDF4-204ENST00000459994 PSME4Q14997 1843 aa19.86■□□□□ 0.77
SDF4-204ENST00000459994 DDX58O95786 925 aaKnown RBP19.86■□□□□ 0.77
SDF4-204ENST00000459994 ITGBL1O95965 494 aaPredicted RBP19.86■□□□□ 0.77
SDF4-204ENST00000459994 CXCL9Q07325 125 aa19.86■□□□□ 0.77
SDF4-204ENST00000459994 KIAA2012Q0VF49 1180 aa19.86■□□□□ 0.77
SDF4-204ENST00000459994 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
SDF4-204ENST00000459994 PCNTO95613 3336 aa19.85■□□□□ 0.77
SDF4-204ENST00000459994 MAP1SQ66K74 1059 aaPredicted RBP19.85■□□□□ 0.77
SDF4-204ENST00000459994 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
SDF4-204ENST00000459994 TMX4Q9H1E5 349 aaPredicted RBP19.85■□□□□ 0.77
SDF4-204ENST00000459994 POLLQ9UGP5 575 aa19.85■□□□□ 0.77
SDF4-204ENST00000459994 CLEC11AQ9Y240 323 aa19.85■□□□□ 0.77
SDF4-204ENST00000459994 ZNF646O15015 1829 aaPredicted RBP19.85■□□□□ 0.77
SDF4-204ENST00000459994 POLR2AP24928 1970 aaKnown RBP19.84■□□□□ 0.77
SDF4-204ENST00000459994 PDE8AO60658 829 aa19.84■□□□□ 0.77
SDF4-204ENST00000459994 FMR1Q06787 632 aaKnown RBP eCLIP19.84■□□□□ 0.77
SDF4-204ENST00000459994 JMYQ8N9B5 988 aa19.84■□□□□ 0.77
SDF4-204ENST00000459994 ZNRF3Q9ULT6 936 aa19.84■□□□□ 0.77
SDF4-204ENST00000459994 NSFL1CQ9UNZ2 370 aaKnown RBP19.84■□□□□ 0.77
SDF4-204ENST00000459994 A0A1B0GUL6 1792 aa19.84■□□□□ 0.77
SDF4-204ENST00000459994 SHTN1A0MZ66 631 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 NEURL1BA8MQ27 555 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 RAD17O75943 681 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 RPS8P62241 208 aaKnown RBP19.83■□□□□ 0.77
SDF4-204ENST00000459994 FLIIQ13045 1269 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 ALDH1L2Q3SY69 923 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
SDF4-204ENST00000459994 CDHR2Q9BYE9 1310 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 RIMBP2O15034 1052 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
SDF4-204ENST00000459994 TMC4Q7Z404 712 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 DBNDD1Q9H9R9 158 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 KCNQ5Q9NR82 932 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
SDF4-204ENST00000459994 GMPSP49915 693 aaPredicted RBP19.81■□□□□ 0.76
SDF4-204ENST00000459994 WTIPA6NIX2 430 aaPredicted RBP19.8■□□□□ 0.76
SDF4-204ENST00000459994 LMOD1P29536 600 aaPredicted RBP19.8■□□□□ 0.76
SDF4-204ENST00000459994 CIAPIN1Q6FI81 312 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms