RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 NBPF7P0C2Y1 421 aaPredicted RBP11.57□□□□□ -0.56
PCCB-202ENST00000459873 HSP90B1P14625 803 aaKnown RBP11.57□□□□□ -0.56
PCCB-202ENST00000459873 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
PCCB-202ENST00000459873 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
PCCB-202ENST00000459873 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
PCCB-202ENST00000459873 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
PCCB-202ENST00000459873 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
PCCB-202ENST00000459873 RRP1P56182 461 aaKnown RBP11.56□□□□□ -0.56
PCCB-202ENST00000459873 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 DALRD3Q5D0E6 543 aaKnown RBP11.56□□□□□ -0.56
PCCB-202ENST00000459873 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
PCCB-202ENST00000459873 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 MEIS3Q99687 375 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
PCCB-202ENST00000459873 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
PCCB-202ENST00000459873 FOXO4P98177 505 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 GRAPQ13588 217 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 RABL6Q3YEC7 729 aaPredicted RBP11.55□□□□□ -0.56
PCCB-202ENST00000459873 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 EPHA10Q5JZY3 1008 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 TTLL6Q8N841 843 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
PCCB-202ENST00000459873 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
PCCB-202ENST00000459873 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 GREM2Q9H772 168 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
PCCB-202ENST00000459873 ZNF646O15015 1829 aaPredicted RBP11.54□□□□□ -0.56
PCCB-202ENST00000459873 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
PCCB-202ENST00000459873 PLIN1O60240 522 aa11.54□□□□□ -0.56
PCCB-202ENST00000459873 CSF1RP07333 972 aa11.54□□□□□ -0.56
PCCB-202ENST00000459873 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
PCCB-202ENST00000459873 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
PCCB-202ENST00000459873 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
PCCB-202ENST00000459873 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
PCCB-202ENST00000459873 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
PCCB-202ENST00000459873 COL4A5P29400 1685 aa11.53□□□□□ -0.56
PCCB-202ENST00000459873 UBTFL1P0CB47 393 aaPredicted RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 MVPQ14764 893 aaKnown RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 C20orf194Q5TEA3 1177 aa11.53□□□□□ -0.56
PCCB-202ENST00000459873 DDX46Q7L014 1031 aaKnown RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
PCCB-202ENST00000459873 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
PCCB-202ENST00000459873 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
PCCB-202ENST00000459873 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
PCCB-202ENST00000459873 PSME4Q14997 1843 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 NFKBIEO00221 500 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 MS4A1P11836 297 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 ALDH1B1P30837 517 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 PDE3AQ14432 1141 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 GPR162Q16538 588 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
PCCB-202ENST00000459873 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.57
PCCB-202ENST00000459873 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
PCCB-202ENST00000459873 C21orf2O43822 256 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 GNAI3P08754 354 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 ITGA6P23229 1130 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 SOGA3Q5TF21 947 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 OLFM4Q6UX06 510 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 CDC5LQ99459 802 aaKnown RBP11.51□□□□□ -0.57
PCCB-202ENST00000459873 ATP6V0A2Q9Y487 856 aa11.51□□□□□ -0.57
PCCB-202ENST00000459873 RASSF7Q02833 373 aa11.5□□□□□ -0.57
PCCB-202ENST00000459873 MTX1Q13505 466 aa11.5□□□□□ -0.57
PCCB-202ENST00000459873 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
PCCB-202ENST00000459873 GRIN3BO60391 1043 aa11.49□□□□□ -0.57
PCCB-202ENST00000459873 BBOX1O75936 387 aa11.49□□□□□ -0.57
PCCB-202ENST00000459873 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
PCCB-202ENST00000459873 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
PCCB-202ENST00000459873 DDX19BQ9UMR2 479 aa11.49□□□□□ -0.57
PCCB-202ENST00000459873 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
PCCB-202ENST00000459873 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 GNAI2P04899 355 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
PCCB-202ENST00000459873 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 PSMD1Q99460 953 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
PCCB-202ENST00000459873 RFX5P48382 616 aaPredicted RBP11.47□□□□□ -0.57
PCCB-202ENST00000459873 PRELPP51888 382 aa11.47□□□□□ -0.57
PCCB-202ENST00000459873 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
PCCB-202ENST00000459873 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
PCCB-202ENST00000459873 CCDC57Q2TAC2 916 aa11.47□□□□□ -0.57
PCCB-202ENST00000459873 SP8Q8IXZ3 490 aa11.47□□□□□ -0.57
PCCB-202ENST00000459873 BSDC1Q9NW68 430 aaPredicted RBP11.47□□□□□ -0.57
PCCB-202ENST00000459873 HDAC5Q9UQL6 1122 aa11.47□□□□□ -0.57
PCCB-202ENST00000459873 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
PCCB-202ENST00000459873 XDHP47989 1333 aa11.46□□□□□ -0.57
PCCB-202ENST00000459873 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
PCCB-202ENST00000459873 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
PCCB-202ENST00000459873 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms