RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	CTSW	P56202	376 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	FOXO4	P98177	505 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	TTLL11	Q8NHH1	800 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	ARHGAP45	Q92619	1136 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	RBM17	Q96I25	401 aa	Known RBP	13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	PLA2G12B	Q9BX93	195 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	UTY	O14607	1347 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	KIF16B	Q96L93	1317 aa		13.02	□□□□□ -0.33
MRPL55-223	ENST00000459783	DCAF8L1	A6NGE4	600 aa		13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	ALDH1B1	P30837	517 aa		13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	FRAT1	Q92837	279 aa	Predicted RBP	13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	SUCLG2	Q96I99	432 aa		13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	API5	Q9BZZ5	524 aa	Known RBP	13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	USP44	Q9H0E7	712 aa		13.01	□□□□□ -0.33
MRPL55-223	ENST00000459783	GOLGB1	Q14789	3259 aa	Known RBP	13	□□□□□ -0.33
MRPL55-223	ENST00000459783	PPEF1	O14829	653 aa	Predicted RBP	13	□□□□□ -0.33
MRPL55-223	ENST00000459783	CSF1R	P07333	972 aa		13	□□□□□ -0.33
MRPL55-223	ENST00000459783	RLBP1	P12271	317 aa		13	□□□□□ -0.33
MRPL55-223	ENST00000459783	GRAP	Q13588	217 aa		13	□□□□□ -0.33
MRPL55-223	ENST00000459783	ATF7IP	Q6VMQ6	1270 aa		13	□□□□□ -0.33
MRPL55-223	ENST00000459783	GRAPL	Q8TC17	118 aa	Predicted RBP	13	□□□□□ -0.33
MRPL55-223	ENST00000459783	GREM2	Q9H772	168 aa		13	□□□□□ -0.33
MRPL55-223	ENST00000459783	RTL9	Q8NET4	1388 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	FAM161A	Q3B820	660 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	INTS3	Q68E01	1043 aa	Known RBP	12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	DDX46	Q7L014	1031 aa	Known RBP	12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	ANKRD44	Q8N8A2	993 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	CLUAP1	Q96AJ1	413 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	ATP6V0A2	Q9Y487	856 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	FER1L6	Q2WGJ9	1857 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	LRRC37A	A6NMS7	1700 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	COL4A5	P29400	1685 aa		12.99	□□□□□ -0.33
MRPL55-223	ENST00000459783	DUOX1	Q9NRD9	1551 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	CCDC152	Q4G0S7	254 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	CCDC93	Q567U6	631 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	MEIS3	Q99687	375 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	RCAN3	Q9UKA8	241 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	UTRN	P46939	3433 aa		12.98	□□□□□ -0.33
MRPL55-223	ENST00000459783	LTBP3	Q9NS15	1303 aa		12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	CCT4	P50991	539 aa	Known RBP	12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	C9orf131	Q5VYM1	1079 aa		12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	ZKSCAN2	Q63HK3	967 aa		12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	LMBR1L	Q6UX01	489 aa		12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	TMEM57	Q8N5G2	664 aa		12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.97	□□□□□ -0.33
MRPL55-223	ENST00000459783	LTBP1	Q14766	1721 aa		12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	IPO8	O15397	1037 aa	Known RBP	12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	PLIN1	O60240	522 aa		12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	BBOX1	O75936	387 aa		12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	RPS8	P62241	208 aa	Known RBP	12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	RABL6	Q3YEC7	729 aa	Predicted RBP	12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	SP8	Q8IXZ3	490 aa		12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	TAOK3	Q9H2K8	898 aa		12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	BICC1	Q9H694	974 aa	Known RBP	12.96	□□□□□ -0.33
MRPL55-223	ENST00000459783	WTIP	A6NIX2	430 aa	Predicted RBP	12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	HSP90B1	P14625	803 aa	Known RBP	12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	ITGA6	P23229	1130 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	GPSM2	P81274	684 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	SOGA3	Q5TF21	947 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	PANK1	Q8TE04	598 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	RNF181	Q9P0P0	153 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	SBF1	O95248	1867 aa		12.95	□□□□□ -0.34
MRPL55-223	ENST00000459783	MYH3	P11055	1940 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	LMNB1	P20700	586 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	CC2D2B	Q6DHV5	1058 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	RTKN2	Q8IZC4	609 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	ZNF594	Q96JF6	807 aa	Predicted RBP	12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	PSMD1	Q99460	953 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	CHD4	Q14839	1912 aa		12.94	□□□□□ -0.34
MRPL55-223	ENST00000459783	C20orf194	Q5TEA3	1177 aa		12.93	□□□□□ -0.34
MRPL55-223	ENST00000459783	ANKRD18A	Q8IVF6	992 aa		12.93	□□□□□ -0.34
MRPL55-223	ENST00000459783	DZIP1L	Q8IYY4	767 aa	Known RBP	12.93	□□□□□ -0.34
MRPL55-223	ENST00000459783	GPR101	Q96P66	508 aa	Predicted RBP	12.93	□□□□□ -0.34
MRPL55-223	ENST00000459783	UBTFL1	P0CB47	393 aa	Predicted RBP	12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	RFX5	P48382	616 aa	Predicted RBP	12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	C1QTNF8	P60827	252 aa		12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	TMC4	Q7Z404	712 aa		12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	MPND	Q8N594	471 aa		12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	CDC5L	Q99459	802 aa	Known RBP	12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	BSDC1	Q9NW68	430 aa	Predicted RBP	12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	POLL	Q9UGP5	575 aa		12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	LRRFIP2	Q9Y608	721 aa	Known RBP	12.92	□□□□□ -0.34
MRPL55-223	ENST00000459783	TIAM2	Q8IVF5	1701 aa		12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	SPEF2	Q9C093	1822 aa		12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	IARS	P41252	1262 aa	Known RBP	12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	DPP8	Q6V1X1	898 aa	Predicted RBP	12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	KLHDC4	Q8TBB5	520 aa		12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	PUS3	Q9BZE2	481 aa	Known RBP	12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	MINPP1	Q9UNW1	487 aa		12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	CHMP3	Q9Y3E7	222 aa		12.91	□□□□□ -0.34
MRPL55-223	ENST00000459783	ANKRD18B	A2A2Z9	1011 aa		12.9	□□□□□ -0.34
MRPL55-223	ENST00000459783	SNAP23	O00161	211 aa		12.9	□□□□□ -0.34
MRPL55-223	ENST00000459783	IFIT5	Q13325	482 aa	Known RBP	12.9	□□□□□ -0.34
MRPL55-223	ENST00000459783	AOC3	Q16853	763 aa		12.9	□□□□□ -0.34
MRPL55-223	ENST00000459783	TBC1D16	Q8TBP0	767 aa		12.9	□□□□□ -0.34
MRPL55-223	ENST00000459783	PODXL2	Q9NZ53	605 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms