RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 G2E3Q7L622 706 aa20.65■□□□□ 0.9
COL7A1-203ENST00000459756 JDP2Q8WYK2 163 aa20.65■□□□□ 0.9
COL7A1-203ENST00000459756 DDNO94850 711 aaPredicted RBP20.64■□□□□ 0.89
COL7A1-203ENST00000459756 FSTL1Q12841 308 aa20.64■□□□□ 0.89
COL7A1-203ENST00000459756 POTECB2RU33 542 aa20.63■□□□□ 0.89
COL7A1-203ENST00000459756 FZD9O00144 591 aa20.63■□□□□ 0.89
COL7A1-203ENST00000459756 FLIIQ13045 1269 aa20.63■□□□□ 0.89
COL7A1-203ENST00000459756 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
COL7A1-203ENST00000459756 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
COL7A1-203ENST00000459756 TAF1P21675 1872 aa20.62■□□□□ 0.89
COL7A1-203ENST00000459756 IGKV5-2P06315 115 aa20.62■□□□□ 0.89
COL7A1-203ENST00000459756 SUPT20HQ8NEM7 779 aa20.62■□□□□ 0.89
COL7A1-203ENST00000459756 RTFDC1Q9BY42 306 aaPredicted RBP20.62■□□□□ 0.89
COL7A1-203ENST00000459756 ZNF541Q9H0D2 1346 aa20.61■□□□□ 0.89
COL7A1-203ENST00000459756 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
COL7A1-203ENST00000459756 DPP8Q6V1X1 898 aaPredicted RBP20.61■□□□□ 0.89
COL7A1-203ENST00000459756 LARGE2Q8N3Y3 721 aa20.61■□□□□ 0.89
COL7A1-203ENST00000459756 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
COL7A1-203ENST00000459756 L3MBTL3Q96JM7 780 aaPredicted RBP20.61■□□□□ 0.89
COL7A1-203ENST00000459756 CDHR2Q9BYE9 1310 aa20.6■□□□□ 0.89
COL7A1-203ENST00000459756 IQCA1LA6NCM1 817 aa20.6■□□□□ 0.89
COL7A1-203ENST00000459756 PDE8AO60658 829 aa20.6■□□□□ 0.89
COL7A1-203ENST00000459756 MPNDQ8N594 471 aa20.6■□□□□ 0.89
COL7A1-203ENST00000459756 CELF1Q92879 486 aaKnown RBP20.6■□□□□ 0.89
COL7A1-203ENST00000459756 LRRC37AA6NMS7 1700 aa20.6■□□□□ 0.89
COL7A1-203ENST00000459756 COL4A5P29400 1685 aa20.59■□□□□ 0.89
COL7A1-203ENST00000459756 NEURL1BA8MQ27 555 aa20.59■□□□□ 0.89
COL7A1-203ENST00000459756 PPIP5K2O43314 1243 aa20.59■□□□□ 0.89
COL7A1-203ENST00000459756 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
COL7A1-203ENST00000459756 CCDC152Q4G0S7 254 aa20.59■□□□□ 0.89
COL7A1-203ENST00000459756 SCN4AP35499 1836 aa20.59■□□□□ 0.89
COL7A1-203ENST00000459756 APLP1P51693 650 aa20.58■□□□□ 0.89
COL7A1-203ENST00000459756 EIF6P56537 245 aaKnown RBP20.58■□□□□ 0.89
COL7A1-203ENST00000459756 RPS8P62241 208 aaKnown RBP20.58■□□□□ 0.89
COL7A1-203ENST00000459756 NIM1KQ8IY84 436 aa20.58■□□□□ 0.89
COL7A1-203ENST00000459756 GPC2Q8N158 579 aa20.58■□□□□ 0.89
COL7A1-203ENST00000459756 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.89
COL7A1-203ENST00000459756 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.89
COL7A1-203ENST00000459756 E9PSI1 815 aa20.57■□□□□ 0.88
COL7A1-203ENST00000459756 AOC3Q16853 763 aa20.57■□□□□ 0.88
COL7A1-203ENST00000459756 LINS1Q8NG48 757 aa20.57■□□□□ 0.88
COL7A1-203ENST00000459756 H7C1W4 665 aa20.55■□□□□ 0.88
COL7A1-203ENST00000459756 CTSWP56202 376 aa20.55■□□□□ 0.88
COL7A1-203ENST00000459756 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
COL7A1-203ENST00000459756 GCKRQ14397 625 aa20.55■□□□□ 0.88
COL7A1-203ENST00000459756 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
COL7A1-203ENST00000459756 COL4A1P02462 1669 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 UBE3BQ7Z3V4 1068 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
COL7A1-203ENST00000459756 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 ZNRF3Q9ULT6 936 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
COL7A1-203ENST00000459756 MYH3P11055 1940 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 DUOX1Q9NRD9 1551 aa20.54■□□□□ 0.88
COL7A1-203ENST00000459756 GJA3Q9Y6H8 435 aa20.53■□□□□ 0.88
COL7A1-203ENST00000459756 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
COL7A1-203ENST00000459756 TTLL11Q8NHH1 800 aa20.52■□□□□ 0.88
COL7A1-203ENST00000459756 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
COL7A1-203ENST00000459756 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
COL7A1-203ENST00000459756 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 LTBP1Q14766 1721 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 F6X3S4 739 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 GPSM2P81274 684 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
COL7A1-203ENST00000459756 CHADLQ6NUI6 762 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
COL7A1-203ENST00000459756 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 EPHX2P34913 555 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 PNMA8AQ86V59 439 aaPredicted RBP20.5■□□□□ 0.87
COL7A1-203ENST00000459756 LDHDQ86WU2 507 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
COL7A1-203ENST00000459756 POTEIP0CG38 1075 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
COL7A1-203ENST00000459756 CASP7P55210 303 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 CXCL9Q07325 125 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 BEND3Q5T5X7 828 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 EYA3Q99504 573 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 GREM2Q9H772 168 aa20.49■□□□□ 0.87
COL7A1-203ENST00000459756 TBC1D16Q8TBP0 767 aa20.48■□□□□ 0.87
COL7A1-203ENST00000459756 ANKIB1Q9P2G1 1089 aa20.48■□□□□ 0.87
COL7A1-203ENST00000459756 SCNN1DP51172 638 aa20.47■□□□□ 0.87
COL7A1-203ENST00000459756 TNIP1Q15025 636 aa20.47■□□□□ 0.87
COL7A1-203ENST00000459756 EAPPQ56P03 285 aaPredicted RBP20.47■□□□□ 0.87
COL7A1-203ENST00000459756 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
COL7A1-203ENST00000459756 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
COL7A1-203ENST00000459756 TRMT2AQ8IZ69 625 aaKnown RBP20.46■□□□□ 0.87
COL7A1-203ENST00000459756 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
COL7A1-203ENST00000459756 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
COL7A1-203ENST00000459756 ADAMTSL1Q8N6G6 1762 aa20.46■□□□□ 0.87
COL7A1-203ENST00000459756 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 ALDH1L1O75891 902 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 UFL1O94874 794 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 CSF1RP07333 972 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 DNAJC5GQ8N7S2 189 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 ZC3H12CQ9C0D7 883 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms