RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RRP9O43818 475 aaKnown RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 CIAO1O76071 339 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 CCDC192P0DO97 292 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 MYL6BP14649 208 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 IL15P40933 162 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 HMGN5P82970 282 aaKnown RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 KIAA2012Q0VF49 1180 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 LRP10Q7Z4F1 713 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 BOLA2Q9H3K6 86 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 ZSCAN16Q9H4T2 348 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 HELLSQ9NRZ9 838 aa10.5□□□□□ -0.73
HDAC3-202ENST00000459727 DDX19AQ9NUU7 478 aaKnown RBP10.5□□□□□ -0.73
HDAC3-202ENST00000459727 ARFGEF2Q9Y6D5 1785 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 A0A087WZG4 1122 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 TAF5LO75529 589 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 RFX5P48382 616 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 MCMDC2Q4G0Z9 681 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 GLIPR1L2Q4G1C9 344 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 MTERF4Q7Z6M4 381 aaKnown RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 KBTBD3Q8NAB2 608 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 CCDC191Q8NCU4 936 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 RGS22Q8NE09 1264 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 NEK1Q96PY6 1258 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 MAP7D2Q96T17 732 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 DSCC1Q9BVC3 393 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 CWC25Q9NXE8 425 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-202ENST00000459727 USP25Q9UHP3 1055 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 CNPY2Q9Y2B0 182 aa10.49□□□□□ -0.73
HDAC3-202ENST00000459727 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 A0A0D9SFI3 127 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 FIBPO43427 364 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-202ENST00000459727 ME3Q16798 604 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 ADCK5Q3MIX3 580 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 UBE3BQ7Z3V4 1068 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
HDAC3-202ENST00000459727 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 TEX13AQ9BXU3 409 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-202ENST00000459727 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-202ENST00000459727 CFAP45Q9UL16 551 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 WDR17Q8IZU2 1322 aa10.48□□□□□ -0.73
HDAC3-202ENST00000459727 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
HDAC3-202ENST00000459727 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 H7C1W4 665 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 SLC39A6Q13433 755 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-202ENST00000459727 SIL1Q9H173 461 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 CTNNA3Q9UI47 895 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 DBNLQ9UJU6 430 aaKnown RBP10.47□□□□□ -0.73
HDAC3-202ENST00000459727 TPCN1Q9ULQ1 816 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 NSFL1CQ9UNZ2 370 aaKnown RBP10.47□□□□□ -0.73
HDAC3-202ENST00000459727 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 TNS2Q63HR2 1409 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 GLI3P10071 1580 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
HDAC3-202ENST00000459727 CTAGE5O15320 804 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 CYP27B1O15528 508 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 GADD45BO75293 160 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-202ENST00000459727 CASP7P55210 303 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 DNM1Q05193 864 aaKnown RBP10.46□□□□□ -0.73
HDAC3-202ENST00000459727 TFCP2Q12800 502 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 MAP3K11Q16584 847 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 NAA16Q6N069 864 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-202ENST00000459727 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.73
HDAC3-202ENST00000459727 GTF3C6Q969F1 213 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 NUP62CLQ9H1M0 184 aa10.46□□□□□ -0.73
HDAC3-202ENST00000459727 ZNF609O15014 1411 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 ZNF335Q9H4Z2 1342 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-202ENST00000459727 KDM4AO75164 1064 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 FGD1P98174 961 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 TRIM28Q13263 835 aaKnown RBP10.45□□□□□ -0.74
HDAC3-202ENST00000459727 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 SPATA32Q96LK8 384 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 CARD10Q9BWT7 1032 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 GDPD2Q9HCC8 539 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
HDAC3-202ENST00000459727 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
HDAC3-202ENST00000459727 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 H3BQV1 296 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 EYA2O00167 538 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 DHX16O60231 1041 aaKnown RBP10.44□□□□□ -0.74
HDAC3-202ENST00000459727 LARGE1O95461 756 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 HSP90B1P14625 803 aaKnown RBP10.44□□□□□ -0.74
HDAC3-202ENST00000459727 TOB2Q14106 344 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-202ENST00000459727 EPHA10Q5JZY3 1008 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 LMBR1LQ6UX01 489 aa10.44□□□□□ -0.74
HDAC3-202ENST00000459727 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms