RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 HNRNPUQ00839 825 aaKnown RBP eCLIP26.41■■□□□ 1.82
VARS-218ENST00000459667 GRIPAP1Q4V328 841 aa26.41■■□□□ 1.82
VARS-218ENST00000459667 PSMD1Q99460 953 aa26.41■■□□□ 1.82
VARS-218ENST00000459667 ZNF277Q9NRM2 450 aaPredicted RBP26.41■■□□□ 1.82
VARS-218ENST00000459667 GCKRQ14397 625 aa26.4■■□□□ 1.82
VARS-218ENST00000459667 MRPL50Q8N5N7 158 aaKnown RBP26.4■■□□□ 1.82
VARS-218ENST00000459667 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.82
VARS-218ENST00000459667 SSH1Q8WYL5 1049 aa26.39■■□□□ 1.82
VARS-218ENST00000459667 H7C1W4 665 aa26.38■■□□□ 1.81
VARS-218ENST00000459667 UBE3BQ7Z3V4 1068 aa26.38■■□□□ 1.81
VARS-218ENST00000459667 SP8Q8IXZ3 490 aa26.38■■□□□ 1.81
VARS-218ENST00000459667 CELF1Q92879 486 aaKnown RBP26.38■■□□□ 1.81
VARS-218ENST00000459667 MYH3P11055 1940 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 CT47B1P0C2W7 299 aaPredicted RBP26.37■■□□□ 1.81
VARS-218ENST00000459667 IARSP41252 1262 aaKnown RBP26.37■■□□□ 1.81
VARS-218ENST00000459667 CCDC152Q4G0S7 254 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 BEND3Q5T5X7 828 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 TMC4Q7Z404 712 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 BCL2L13Q9BXK5 485 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 COL4A1P02462 1669 aa26.37■■□□□ 1.81
VARS-218ENST00000459667 LRRC37AA6NMS7 1700 aa26.36■■□□□ 1.81
VARS-218ENST00000459667 ALDH1L2Q3SY69 923 aa26.36■■□□□ 1.81
VARS-218ENST00000459667 NMRK2Q9NPI5 230 aa26.36■■□□□ 1.81
VARS-218ENST00000459667 GLTPD2A6NH11 291 aa26.35■■□□□ 1.81
VARS-218ENST00000459667 CTSWP56202 376 aa26.35■■□□□ 1.81
VARS-218ENST00000459667 CCDC85AQ96PX6 553 aaPredicted RBP26.35■■□□□ 1.81
VARS-218ENST00000459667 KIF3CO14782 793 aa26.34■■□□□ 1.81
VARS-218ENST00000459667 SLC4A10Q6U841 1118 aa26.34■■□□□ 1.81
VARS-218ENST00000459667 SEC31BQ9NQW1 1179 aa26.34■■□□□ 1.81
VARS-218ENST00000459667 SMC4Q9NTJ3 1288 aa26.34■■□□□ 1.81
VARS-218ENST00000459667 PTPRCP08575 1304 aa26.34■■□□□ 1.81
VARS-218ENST00000459667 DPY19L2Q6NUT2 758 aa26.33■■□□□ 1.81
VARS-218ENST00000459667 DPP8Q6V1X1 898 aaPredicted RBP26.33■■□□□ 1.81
VARS-218ENST00000459667 CASP7P55210 303 aa26.32■■□□□ 1.8
VARS-218ENST00000459667 RPS8P62241 208 aaKnown RBP26.32■■□□□ 1.8
VARS-218ENST00000459667 MPNDQ8N594 471 aa26.32■■□□□ 1.8
VARS-218ENST00000459667 SUPT20HQ8NEM7 779 aa26.31■■□□□ 1.8
VARS-218ENST00000459667 TTLL11Q8NHH1 800 aa26.31■■□□□ 1.8
VARS-218ENST00000459667 PLA2G12BQ9BX93 195 aa26.31■■□□□ 1.8
VARS-218ENST00000459667 SRCIN1Q9C0H9 1055 aa26.31■■□□□ 1.8
VARS-218ENST00000459667 ALDH1L1O75891 902 aa26.3■■□□□ 1.8
VARS-218ENST00000459667 C1QTNF8P60827 252 aa26.3■■□□□ 1.8
VARS-218ENST00000459667 JDP2Q8WYK2 163 aa26.3■■□□□ 1.8
VARS-218ENST00000459667 RTFDC1Q9BY42 306 aaPredicted RBP26.3■■□□□ 1.8
VARS-218ENST00000459667 RRAGCQ9HB90 399 aa26.3■■□□□ 1.8
VARS-218ENST00000459667 COL4A5P29400 1685 aa26.29■■□□□ 1.8
VARS-218ENST00000459667 LARGE2Q8N3Y3 721 aa26.29■■□□□ 1.8
VARS-218ENST00000459667 DUOX1Q9NRD9 1551 aa26.29■■□□□ 1.8
VARS-218ENST00000459667 WDR90Q96KV7 1748 aa26.28■■□□□ 1.8
VARS-218ENST00000459667 PPIP5K2O43314 1243 aa26.28■■□□□ 1.8
VARS-218ENST00000459667 GREM2Q9H772 168 aa26.28■■□□□ 1.8
VARS-218ENST00000459667 RTL9Q8NET4 1388 aa26.28■■□□□ 1.8
VARS-218ENST00000459667 GRM8O00222 908 aa26.27■■□□□ 1.8
VARS-218ENST00000459667 AOC3Q16853 763 aa26.27■■□□□ 1.8
VARS-218ENST00000459667 ANKRD18AQ8IVF6 992 aa26.27■■□□□ 1.8
VARS-218ENST00000459667 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
VARS-218ENST00000459667 ZBED9Q6R2W3 1325 aa26.26■■□□□ 1.79
VARS-218ENST00000459667 ZNF541Q9H0D2 1346 aa26.26■■□□□ 1.79
VARS-218ENST00000459667 FZD9O00144 591 aa26.26■■□□□ 1.79
VARS-218ENST00000459667 DDNO94850 711 aaPredicted RBP26.26■■□□□ 1.79
VARS-218ENST00000459667 VPS33BQ9H267 617 aa26.26■■□□□ 1.79
VARS-218ENST00000459667 C9orf78Q9NZ63 289 aaPredicted RBP26.26■■□□□ 1.79
VARS-218ENST00000459667 NSFL1CQ9UNZ2 370 aaKnown RBP26.26■■□□□ 1.79
VARS-218ENST00000459667 SPEF2Q9C093 1822 aa26.25■■□□□ 1.79
VARS-218ENST00000459667 GPSM2P81274 684 aa26.25■■□□□ 1.79
VARS-218ENST00000459667 LTBP1Q14766 1721 aa26.25■■□□□ 1.79
VARS-218ENST00000459667 RARSP54136 660 aaKnown RBP26.24■■□□□ 1.79
VARS-218ENST00000459667 NIM1KQ8IY84 436 aa26.24■■□□□ 1.79
VARS-218ENST00000459667 C16orf71Q8IYS4 520 aaPredicted RBP26.24■■□□□ 1.79
VARS-218ENST00000459667 CSF1RP07333 972 aa26.23■■□□□ 1.79
VARS-218ENST00000459667 VEGFAP15692 232 aaPredicted RBP26.23■■□□□ 1.79
VARS-218ENST00000459667 BRPF1P55201 1214 aaPredicted RBP26.23■■□□□ 1.79
VARS-218ENST00000459667 FAM161AQ3B820 660 aa26.23■■□□□ 1.79
VARS-218ENST00000459667 TOMM70O94826 608 aa26.22■■□□□ 1.79
VARS-218ENST00000459667 ITGA6P23229 1130 aa26.22■■□□□ 1.79
VARS-218ENST00000459667 EIF6P56537 245 aaKnown RBP26.22■■□□□ 1.79
VARS-218ENST00000459667 KIAA2012Q0VF49 1180 aa26.22■■□□□ 1.79
VARS-218ENST00000459667 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
VARS-218ENST00000459667 FOXO4P98177 505 aa26.21■■□□□ 1.79
VARS-218ENST00000459667 POTECB2RU33 542 aa26.2■■□□□ 1.78
VARS-218ENST00000459667 C6orf229H3BNL8 230 aa26.2■■□□□ 1.78
VARS-218ENST00000459667 IGHMBP2P38935 993 aaKnown RBP26.2■■□□□ 1.78
VARS-218ENST00000459667 PODXL2Q9NZ53 605 aa26.2■■□□□ 1.78
VARS-218ENST00000459667 ANKIB1Q9P2G1 1089 aa26.2■■□□□ 1.78
VARS-218ENST00000459667 POLLQ9UGP5 575 aa26.2■■□□□ 1.78
VARS-218ENST00000459667 KIF16BQ96L93 1317 aa26.19■■□□□ 1.78
VARS-218ENST00000459667 WASHC4Q2M389 1173 aa26.19■■□□□ 1.78
VARS-218ENST00000459667 TBC1D16Q8TBP0 767 aa26.19■■□□□ 1.78
VARS-218ENST00000459667 L3MBTL3Q96JM7 780 aaPredicted RBP26.19■■□□□ 1.78
VARS-218ENST00000459667 API5Q9BZZ5 524 aaKnown RBP26.19■■□□□ 1.78
VARS-218ENST00000459667 BSDC1Q9NW68 430 aaPredicted RBP26.19■■□□□ 1.78
VARS-218ENST00000459667 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
VARS-218ENST00000459667 UTYO14607 1347 aa26.18■■□□□ 1.78
VARS-218ENST00000459667 NBPF7P0C2Y1 421 aaPredicted RBP26.18■■□□□ 1.78
VARS-218ENST00000459667 EPHA10Q5JZY3 1008 aa26.18■■□□□ 1.78
VARS-218ENST00000459667 GPC2Q8N158 579 aa26.18■■□□□ 1.78
VARS-218ENST00000459667 EYA3Q99504 573 aa26.18■■□□□ 1.78
VARS-218ENST00000459667 ZNRF3Q9ULT6 936 aa26.18■■□□□ 1.78
VARS-218ENST00000459667 XDHP47989 1333 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 SCN4AP35499 1836 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms